Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3818 ATGGGCAGGAAAGGAACTAATGCAGTCCCTATGAGAGCTCTCGTCCAAATCAAAGCAAGGGAACCGCGAATTCGTAACGAAATAGGCATGATATCTGCTTTGCAGCATCCCAATCTGTTGAAACTTTATGGATGTTGCATTGAAGGAAACCAATTGCTGCTTGTATATGAATACATGGAGAACAATAGTCTTGCTCGTGCTCTTTTCGTAAGGCCAGAACAAAAGTTGAACTTGGACTGGCGCACGAGAATGAAGATTTGTGTAGGGATAGCAAAGAGAAGAAAAAACCATATCAGCACGCGAATAGCTGGGACAATAGGTTACATGGCTCCTGAGTATGCAATGCGGGGTTACTTAACCGACAAAGCAGATGCCAAAAGAGGAATTTGTTTATCTTCTGGATTGGGCCTATGTTCTCCAAGAACAGGAACCTTCTGGAATTGGTGGATCCAAGTCTTGGTTCAAACTACTCAACTGAAGAGGCATGAGAATGCTGCAAATGGCACTCCTTTGCACCAATCCATCTCCAACTCTTAG 537 0.4376 MGRKGTNAVPMRALVQIKAREPRIRNEIGMISALQHPNLLKLYGCCIEGNQLLLVYEYMENNSLARALFVRPEQKLNLDWRTRMKICVGIAKRRKNHISTRIAGTIGYMAPEYAMRGYLTDKADAKRGICLSSGLGLCSPRTGTFWNWWIQVLVQTTQLKRHENAANGTPLHQSISNS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3818 178 Gene3D Transferase(Phosphotransferase) domain 1 8 93 - -
Psa5g3818 178 Pfam Protein tyrosine and serine/threonine kinase 21 91 IPR001245 GO:0004672|GO:0006468
Psa5g3818 178 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 92 - -
Psa5g3818 178 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 95 124 - -
Psa5g3818 178 SUPERFAMILY Protein kinase-like (PK-like) 20 124 IPR011009 -
Psa5g3818 178 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 95 124 - -
Psa5g3818 178 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 26 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3818 Psa-Chr5 301125715 301127638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3818 27 124 Receptor kinase-like Gene Family AT1G53430 57.447 4.04e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa5g3818 PK_Tyr_Ser-Thr 2.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3818 - - cpap:110812489 161.384