Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3779 ATGGCGGCAACGCTTAGTTTCGCCGCTCTCTCCGCCGTCCGTCCCCTCGGATTCACCGATGAATGTTCCACCTCCGCCAGATTCATCCAGAAACCGAGTTCAACTTTCTCAAACCGCCGCAGGGTTTCAATCCGAGCCGTAGCCGCTATAGTCGAGACACGGCGGCCAGCGAAGAGTCTGTACGAAATTCTCCGACTTAAGCCAGGAGCATCACCTACAGACATCAAATCGGCTTACCGAAGTCTAGCGAAGGTTTATCATCCCGACACGGCGGTGCAACGATTGCCGGAATCTGACGACGTAGACTTCATCGAGATCCGCAACGCTTATGAGACGCTTTATGATCCGTCGACAAGAGCGATTTACGATATGTCGCTGATGGCAGTACACGGCGGAAGGAGCCGACAGTTTTCGGCTCCGGTGATACAGAAACGGTATTCTGGATATTATATGAAGAGAAGATGGGAAACGGACCAATGCTGGTAG 486 0.5267 MAATLSFAALSAVRPLGFTDECSTSARFIQKPSSTFSNRRRVSIRAVAAIVETRRPAKSLYEILRLKPGASPTDIKSAYRSLAKVYHPDTAVQRLPESDDVDFIEIRNAYETLYDPSTRAIYDMSLMAVHGGRSRQFSAPVIQKRYSGYYMKRRWETDQCW* 162
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3779 161 SUPERFAMILY Chaperone J-domain 55 132 IPR036869 -
Psa5g3779 161 ProSiteProfiles dnaJ domain profile. 59 126 IPR001623 -
Psa5g3779 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
Psa5g3779 161 CDD DnaJ 61 115 IPR001623 -
Psa5g3779 161 SMART dnaj_3 58 118 IPR001623 -
Psa5g3779 161 Gene3D DnaJ domain 48 146 IPR036869 -
Psa5g3779 161 PRINTS DnaJ domain signature 61 79 IPR001623 -
Psa5g3779 161 PRINTS DnaJ domain signature 79 94 IPR001623 -
Psa5g3779 161 PRINTS DnaJ domain signature 98 118 IPR001623 -
Psa5g3779 161 Pfam DnaJ domain 60 123 IPR001623 -
Psa5g3779 161 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Psa5g3779 161 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 161 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa5g3779 Psa-Chr5 297364638 297365873 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3779 53 123 C2H2 Transcription Factor Family AT1G74250 39.189 5.72e-08 49.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3779 - - gmx:100798752 169.088
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3779 5 297364638 297365873 Psa5g3779 5 297364638 297365873 ECH