Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3778 ATGGCGACAATGCTCAGTTTCACCGGGCTCTCCGCCCGGCCACTCCGATTCTCCGATGACTGCTCCAATAGCTCAAATCGGCGCATGGTTTCCGTCCGAGCCGCGGCGGTAGTAGTCGACACACGGAGGCCGGCGAGTAGTCTCTACGAAGTTCTACGACTTCAGCCGGGAGCATCTCATTTGGAGATCAAATCGGCTTACCGAAGTCTGGCAAAGGTTTACCATCCCGACGCGGCGGCCCAACGGTTACCGGAGTATGATGACAGCGACTTCATCGAGATCCGTAAAGCTTACGAGACGCTTTCAGATCCGTCAGCGAGAGCAGTTTACGACATGTCGTTGATGGCGGCAGAATGCGAGAGGAATAGGCAGTTTTCGGCTTCGGTGACACCACAGAAACGGTATTCGAGATATATAAGATGGGAAACGGACCAATGCTGGTAG 444 0.545 MATMLSFTGLSARPLRFSDDCSNSSNRRMVSVRAAAVVVDTRRPASSLYEVLRLQPGASHLEIKSAYRSLAKVYHPDAAAQRLPEYDDSDFIEIRKAYETLSDPSARAVYDMSLMAAECERNRQFSASVTPQKRYSRYIRWETDQCW* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3778 147 ProSiteProfiles dnaJ domain profile. 47 114 IPR001623 -
Psa5g3778 147 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 147 - -
Psa5g3778 147 PRINTS DnaJ domain signature 49 67 IPR001623 -
Psa5g3778 147 PRINTS DnaJ domain signature 67 82 IPR001623 -
Psa5g3778 147 PRINTS DnaJ domain signature 86 106 IPR001623 -
Psa5g3778 147 CDD DnaJ 49 103 IPR001623 -
Psa5g3778 147 SUPERFAMILY Chaperone J-domain 45 117 IPR036869 -
Psa5g3778 147 SMART dnaj_3 46 106 IPR001623 -
Psa5g3778 147 Gene3D DnaJ domain 35 136 IPR036869 -
Psa5g3778 147 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Psa5g3778 147 Pfam DnaJ domain 48 111 IPR001623 -
Psa5g3778 147 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3778 Psa-Chr5 297353678 297354798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3778 49 111 C2H2 Transcription Factor Family AT1G74250 46.970 6.89e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3778 - - gmx:100778445 143.28