Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3775 ATGGAATTGAAGCCTCTTCCACTCATTGTAGGAAGAAAAGACGCAAGTGAAGAAAAAAAGAAGAAAAATTCAGGAACATTATTGACACTTTCAGCAGAACAAGTTGAAGAGTTGAAGAAAAAAGCTAATGAATATAATATGAAGAAAAAAGGGTGTAGGGGTTTTAGTAGATTTGAAGCAATTGGTGCACATTTATGGAGATGTGCATCTAAGGCGCGTGAGCTTGGAGAGAATCAAGAGAGTGTTGTTAGATTCAATGCTGATATTAGAACAAGAATGATCCCACCTCTTCCTAAAAACTATTTTGGGAATGCTTTGACACAAACAGCTGCAAAAGGGTATGTTGGAGAAATCACATCAAAGCCATTAGGTTATGTTTCAAAAATCATAAGGGAAGCTACTGAGATTGTTACAGATGAATTTATAAGGTCGCAAATTGATGTTATTAGGGGATTTGAACATTTGGATGATGCAAGGGCTTTGTTTTTAGGTGCTGTAGGTGATAATTTTCCATATTTTGGGAACCCTAATTTTCATTTAACTAGTTGGATGAGTATGCCAGTTTATGAAGCTGATTTTGGATGGGGGAAGCCTGATTATTTCGGAATGGCTAATTTGTTTCCACATGATAGGGCAGTCATCCTTCTTAGTCCTGATGAAGACGGATCTATTCTTGTATGTTTGCATTTTCAGATTGCACACTTGGAGCTTTTCAAGAATGGTGGTGGTGGTGGTGGTATTGATAGTGGTAGTAGTTGTAGTCGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGATAGTAGTAGTAGCAATGGTAGTGGTAATAATAGTGGTGATAGTGGTGGTAGTAGTGGTGGTGGTAGTGGTAGTAGTAATAGTGGTAGTAGTAGTAGTCCAACAGGTTCTACTTGCAATTTCCTTTCAACTGAGTTAACCCTAAGCATCTTGTCATCTAATCAACTAATAAAACCTGCAGAAAGTATACCTGCACGAGCATGTCATCATTTAATCCATAGCAACTTCTCATGA 1026 0.384 MELKPLPLIVGRKDASEEKKKKNSGTLLTLSAEQVEELKKKANEYNMKKKGCRGFSRFEAIGAHLWRCASKARELGENQESVVRFNADIRTRMIPPLPKNYFGNALTQTAAKGYVGEITSKPLGYVSKIIREATEIVTDEFIRSQIDVIRGFEHLDDARALFLGAVGDNFPYFGNPNFHLTSWMSMPVYEADFGWGKPDYFGMANLFPHDRAVILLSPDEDGSILVCLHFQIAHLELFKNGGGGGGIDSGSSCSRGGGGGGGGSDSSSSNGSGNNSGDSGGSSGGGSGSSNSGSSSSPTGSTCNFLSTELTLSILSSNQLIKPAESIPARACHHLIHSNFS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3775 341 Gene3D - 10 240 IPR023213 -
Psa5g3775 341 MobiDBLite consensus disorder prediction 261 298 - -
Psa5g3775 341 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 11 240 - -
Psa5g3775 341 Pfam Transferase family 16 240 - -
Psa5g3775 341 Coils Coil 28 48 - -
Psa5g3775 341 MobiDBLite consensus disorder prediction 254 298 - -
Psa5g3775 341 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3775 Psa-Chr5 297158887 297161775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3775 1 239 Monolignol Biosynthesis Gene Families AT5G48930 30.962 3.92e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3775 K13065 - gmx:100778626 287.345