Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3739 ATGAAAAAACCACCAACTTCAACTTTGCATCAATCAAACCAAAGGAAGAAAAATATTGGCACAAATAGACACAATCCTAAGGATGATGATTATGGTACCATGACAAATTTCAAGTATGTTGTTAAAAAGATTTCAGGTCTTTTCACATTGATTCTGTATGGGAAATCAAAAACATCCTCAGAAGCTGTTGAACATGATTCTGCAAGGAATAATAATAAAGTCAGAGGAGTATCATCTTCAACAGATGTATCATCTGAAGGTTCTAAGAGTTCATCAAAATGGAAATCTTCTCATCCTTCAACACCTTCTAGCACTTCAAGTAATCAAATTGGAACTGGAAATTTTTCATTTGAAGAACTTTACAAGGCAACAGGAAAATTTTCTCCGGATAATAAGATTGGAGAAGGGGCGTTTGGGATAGTGTATAAAGGAAAGCTTTATGATGGAACCCTTGTGGCTGTAAAGTGTGCTAGGAAGGATGTACAAAAGAAGCACTTGGCTGAGTTCAAGAATGAAATAAACACGTTATCAAAAATGGAGCATCTGAATCTTGTGAAATGGCATGGATATTTGGAGCATGGAGATGAAAAGATTATTGTTATTGAATATGTTAATAATGGAACTCTTAGGGAACATCTAGATGGTGTGAGAGGAAATGGACTTGAGATTGGTGAGCGTCTAGATGTAGCAATTGATGTAGCTCATGCAGTTACACACCTTCATATGTACACAGGAAGATATCCAGTTGAACCAAAGAAACCCCTCGAAGAAAGAGTTACAATTAAATGGGCAATGCAGTTATTAAAACAAGGAGAAGAAGTGATTGCAATGGATCCAAGGCTTAGGAGAAGTTCAGCCTCAAACAAAGCTGTACAAAAGGTTCTCAAGCTTGCATTCCAATGCCTTGCACCAGTACGAAGATCGCGGCCATCGATGCAGAATTGTGCAGAGGTTCTATGGGACATCCGGAAAGAATACAGAGACAAAGTATCTTCTCGTCCTCGCCTCGCTTCTCACCATTCAGCAGATTTTCCTCAGAAAGATTCGAGAAAGAATAGACGTAAGACATTCGGTATTGAAGATGACAAGAAATATAAATTTGTGTCTGCATAA 1113 0.3783 MKKPPTSTLHQSNQRKKNIGTNRHNPKDDDYGTMTNFKYVVKKISGLFTLILYGKSKTSSEAVEHDSARNNNKVRGVSSSTDVSSEGSKSSSKWKSSHPSTPSSTSSNQIGTGNFSFEELYKATGKFSPDNKIGEGAFGIVYKGKLYDGTLVAVKCARKDVQKKHLAEFKNEINTLSKMEHLNLVKWHGYLEHGDEKIIVIEYVNNGTLREHLDGVRGNGLEIGERLDVAIDVAHAVTHLHMYTGRYPVEPKKPLEERVTIKWAMQLLKQGEEVIAMDPRLRRSSASNKAVQKVLKLAFQCLAPVRRSRPSMQNCAEVLWDIRKEYRDKVSSRPRLASHHSADFPQKDSRKNRRKTFGIEDDKKYKFVSA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3739 370 Gene3D Transferase(Phosphotransferase) domain 1 240 342 - -
Psa5g3739 370 PANTHER OS02G0821400 PROTEIN 1 242 - -
Psa5g3739 370 PANTHER OS02G0821400 PROTEIN 242 360 - -
Psa5g3739 370 ProSiteProfiles Protein kinase domain profile. 127 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3739 370 MobiDBLite consensus disorder prediction 72 109 - -
Psa5g3739 370 Pfam Protein tyrosine and serine/threonine kinase 130 241 IPR001245 GO:0004672|GO:0006468
Psa5g3739 370 PANTHER OS01G0253100 PROTEIN 1 242 IPR045271 GO:0004714|GO:0006468
Psa5g3739 370 PANTHER OS01G0253100 PROTEIN 242 360 IPR045271 GO:0004714|GO:0006468
Psa5g3739 370 MobiDBLite consensus disorder prediction 59 109 - -
Psa5g3739 370 ProSitePatterns Protein kinases ATP-binding region signature. 133 159 IPR017441 GO:0005524
Psa5g3739 370 SUPERFAMILY Protein kinase-like (PK-like) 101 320 IPR011009 -
Psa5g3739 370 Gene3D Phosphorylase Kinase; domain 1 85 203 - -
Psa5g3739 370 MobiDBLite consensus disorder prediction 1 19 - -
Psa5g3739 370 MobiDBLite consensus disorder prediction 331 357 - -
Psa5g3739 370 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3739 Psa-Chr5 295392960 295396367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3739 112 241 Trihelix Transcription Factor Family AT4G32710 43.846 6.99e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Psa5g3739 PK_Tyr_Ser-Thr 4.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3739 - - gmx:100819818 293.508