Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3736 ATGGCATCCATTGTTACTTTCTTCAACAAGTTTTGCTATCTTTTCATCCTCATTCTCCACCTTGGCTGCTTCATGTTCACCACCGCCGCCGTCACCGCCGGAAAACAAAAACAAGACAGCTGTCATTTGTTACCTTCAAAGAAACGCAAAATCTTACCTTTATCTCAACCCTCTTCACCTTCCCACCCTAAATTCAAAACCCATAAAGCTCTTTCTTCTTCTTGGCATTTTGTCAAACACCTCTTCTCCGCTAAATCCTGCAAAACCGCCATCACTGCTGCCACCACCACACAAGCATCACCTCAATCCACATCAACCACCGTGAAATCCTCCCAACAATCGCTTATCTCGCTTGTTCAATCCGACTTGAGTTTCACGGATCCCCCACGCAAGAAACAACCCGAATCAGATATCTCCGCCGACAACAACAACCTGTTCTTCCCCCTGCGTAACGACATCTTCCCATGCACCGTCTGCGGCGAGATTTTCCAGAAACCCAACCTCCTAGAGAATCACCAATCCACAAACCACGCCGTGTCGGAACTTACCGGATCCGACCCGGGTCACAACATAGTCCAAATCATATTCAAATCGGGTTGGCCTGAAACAAACGAGTCTCCAACTATTCACCGAATCCTAAAGATCCACAACAGCCAGAAAATCCTCTCAAAATTCGAAGAATATCGCGAATCAGTAAAATCCAAAGCCACGCGAAACACGCGCCGCCGCGACGAACGCTGCATCGCCGACGGAAACGAACTAATGCGTTTTCACTGCTCCACGTTTCTATGCGAGTTAGGACATAACAGGGATTCTTCAATTTGTTCTCAGCAATTTTGTAATATCTGCGGAATTATTAAATCAGGTTTTTCACAAAAATTAGACGGAATTTCCACGCTGTCAACAAGCTGGAGGGCAAACATGTCAATTCCCGATGACATCGAACGTGAATTTCGCTTCATGAACGTGAAACGGGCCATGCTTGTTTGTAGGGTGATTGCGGGTCGGGTTGGATCCGATTCGGATGATGAGATGGATAAAACCGATGGGGGTTTTGATTCGGTGATGGCACGTGAAGAGAGTGAGTTGGTAGTTTTTAATCCTAGGGCCGTGCTTCCTTGTTTTGTGATTGTGTATAGTGTGTGA 1146 0.4642 MASIVTFFNKFCYLFILILHLGCFMFTTAAVTAGKQKQDSCHLLPSKKRKILPLSQPSSPSHPKFKTHKALSSSWHFVKHLFSAKSCKTAITAATTTQASPQSTSTTVKSSQQSLISLVQSDLSFTDPPRKKQPESDISADNNNLFFPLRNDIFPCTVCGEIFQKPNLLENHQSTNHAVSELTGSDPGHNIVQIIFKSGWPETNESPTIHRILKIHNSQKILSKFEEYRESVKSKATRNTRRRDERCIADGNELMRFHCSTFLCELGHNRDSSICSQQFCNICGIIKSGFSQKLDGISTLSTSWRANMSIPDDIEREFRFMNVKRAMLVCRVIAGRVGSDSDDEMDKTDGGFDSVMAREESELVVFNPRAVLPCFVIVYSV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3736 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 154 182 IPR013087 -
Psa5g3736 381 Gene3D - 178 380 - -
Psa5g3736 381 PANTHER NUCLEIC ACID BINDING PROTEIN 3 380 - -
Psa5g3736 381 ProSitePatterns Zinc finger C2H2 type domain signature. 156 177 IPR013087 -
Psa5g3736 381 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 380 - -
Psa5g3736 381 SUPERFAMILY ADP-ribosylation 180 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3736 Psa-Chr5 295000823 295002959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3736 75 381 C2H2 Transcription Factor Family AT2G29660 51.212 6.06e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa5g3736 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3736 - - gmx:100785244 540.036