Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3704 ATGCCTTCAGTTTCCTCCAAACGCAGATTCAGATCTCATGCATCACCTACTCCGGCCGCCGCCTCTCCGCCCAGCCGGAAGTCCCCCCGCCATTGCATCGCCGCAACTCCCAATTCTGTTCCGCCTGTAGCTCGCAGAATCATCACCGATGAGAATCAAATTGAGTCCTGTGAAACAGTAGCAGTGAAATCCAAATGGAATCCCAAAGATGGAGAGCAATTGAGGAGTGTGAAGGAGGTATTGCACTTGTCTACTGCACCGTCTACCATAGTGTGTCGTAAGGAGGAGCAAGATGTGGTGTTAGGGTTTTGTAAAGGATCTGTTGAGCATGAAAAGGCTGGGAGTCTTTATATATGTGGGTGTCCTGGAACAGGAAAATCGCTCTCTATGGTGAAAGTGAAAGTGAATTTGCTCAATTGGGCTACAGAGGCAGGATTGCCACTGCCGGATGTTTTATCTGTAAATTGTACATCCCTGTCAAACACTTCTGATATTTTTGCAAAGATACTTGGATTACACAAAACTCTTGGGAAGAAGGCTTCAGGAACACCCTTGCAGCAACTTCAGAATATGTATTCTCATAAATCATGTACAAAGAGCATGATATTGATAGTAGCAGATGAATTAGATTATCTAATAACCAAAGACAGAGCTGTGCTTCATGATCTTTTCATGCTTACCACTTTCCCATTTTCTAGATGTATACTGATAGGCGTAGCTAATGCAATTGACCTAGCAGATCGATTTCTTCCAAGGCTTACTGCATTAAATTGCAAGCCCACTGTTGTAACTTTTCGAGCATACACAAAAGATCAGATCCTTAAGATTCTTAAAGAAAGGTTAAATGAACTTCCTTACACAGTCTTCCAACATCAAGCATTAGAACTATGTGCCAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGAAATGCTCTTTCCATATGCAGGAGTGCAATTGAGATGTTAGAAGCAGAAATTAGAGACTCTGCTTCCAATTTGAATGCTTTAGAAGAGAAATCATCATCAGAACAAAATCTTCCTACAGCTCTGGAAGTTGTAAATAAACAAGAACTTGATATGGTAAGGATTGATCATATGGCTCTTGCCTTGTCTAAAACATATAGATCACCAGTGGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTCTGCTCTACAATGAAACATTTCCGTGGAGCCAAGAAGGACTCAATCCTTGGCGAGGTATGCTATCAGCTGTGA 1251 0.4205 MPSVSSKRRFRSHASPTPAAASPPSRKSPRHCIAATPNSVPPVARRIITDENQIESCETVAVKSKWNPKDGEQLRSVKEVLHLSTAPSTIVCRKEEQDVVLGFCKGSVEHEKAGSLYICGCPGTGKSLSMVKVKVNLLNWATEAGLPLPDVLSVNCTSLSNTSDIFAKILGLHKTLGKKASGTPLQQLQNMYSHKSCTKSMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTALNCKPTVVTFRAYTKDQILKILKERLNELPYTVFQHQALELCARKVAAASGDMRNALSICRSAIEMLEAEIRDSASNLNALEEKSSSEQNLPTALEVVNKQELDMVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSTMKHFRGAKKDSILGEVCYQL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3704 416 Gene3D - 70 260 IPR027417 -
Psa5g3704 416 Pfam AAA lid domain 290 324 IPR041083 -
Psa5g3704 416 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 19 408 - -
Psa5g3704 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 328 IPR027417 -
Psa5g3704 416 Gene3D - 261 337 - -
Psa5g3704 416 MobiDBLite consensus disorder prediction 1 31 - -
Psa5g3704 416 Coils Coil 319 339 - -
Psa5g3704 416 CDD AAA 96 254 - -
Psa5g3704 416 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 19 408 - -
Psa5g3704 416 PIRSF Cdc6 3 414 IPR016314 GO:0006270|GO:0051301
Psa5g3704 416 Pfam AAA domain 111 228 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3704 Psa-Chr5 290946356 290950216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3704 7 412 Core DNA Replication Machinery Family AT1G07270 57.381 4.74e-161 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3704 K02213 - gmx:100791200 602.053