LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g3679	ATGGAGGTTTCATGGGAACAAAGTGTCACCTATTCTATCAACACAATTTACCTTCTCTTCTCTGCTTACTTAGTTTTTGTAATGCAGCTAGGATTTGCCATGATATGTGCAGGATCTGTCCGGGCCAAAAATGCTATGAACATAATGCTTACCAATGTAGTTGATGCAGTGGTAGGTAGCATCTCTTTCTATCTTTTTGGTTTCGCATTTGCTTATGGCAATTCCAACCCTTTCATTGGTACAAATTTGTTTGCTTTAGCTAATATTCCAAATGAAAATTATGATTATGGATTCTTCCTTTACCAATGGGCTTTTGCTATAGCTGTAGCAGGTATAACTAGTGGGTCCATAGCTGAGAGAACACAATTTAGTGCTTATCTTGTTTTTTCATTTTTTCTTACTGGCTTTGTGTATCCTATTGTGGCCCATTGGGTTTGGTCATCTAGTGGTTGGCTTAGTCCAAATGCAAGTCATTTGTTCTTGGGCTCAGGTGCCATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGGCATTGCTGGACTTTGGGGGTCTATTATAGAAGGTCCGCGGGTCGGGCGGTTTGATGCTTACGGAAAGCCCGTACCTTTCCGCGGCCACAATGCCTCACTTGTGGTTCTCGGGACGTTCTTGTTGTGGTTCGGTTGGTTCGGGTTTAATCCTGGTTCGTTCGACAAAATTCTCGTGGCCTACCCTAACACATCTGATGAAGGCAATTGGACATCGGTGGGCCGGACGGCCGTGACAACCACATTGGCAGGCTCGACCGCGGGGATTGTCACTTTGTTCAGCCGTCGATTATTGATTGGCCACTGGGATGCAATGGATGTATGCAACGGTTTGATTGGCGGGTTCGTCGCCATCACATCCGGGTGCTCGGTTGTTGAGCCATGGGCCGCTATTATATGCGGATTCGTCTCGGCTTGGGTGTTAATCGGGCTCAACATCTTGGCACTAAAACTAAACTATGATGATCCATTAGAGGCAGCCCAATTACATGGTGGATGTGGCATTTGGGGATTGTTGTTTACAGGGCTATTTGCCAAAGAGGGGTTTGTGGTTCAAACATATAATGCAGGGGTGGCAGTGAAAAGACCCTATGGTCTTCTACTTGGAGGTGGATGGGGATTGATTGGAGCTCAAGTGGTTGAGATTTTGGTTATCTTTGGATTTGTTAGTATAACAATGGGACCTATGTTCTATGCCTTGCACAAACTTAAGTTACTAAGAATTCCTGTGGCTGATGAACTTGCTGGTCTTGATATATCCAGCCATGGAGGCTATGCTTATGCTCATCATGAGGAAAATCATGCTCGATCTTATGGAGATTATATGCGTATGCAAGATAATCAATCGTAG	1383	0.4483	MEVSWEQSVTYSINTIYLLFSAYLVFVMQLGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTNLFALANIPNENYDYGFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLTGFVYPIVAHWVWSSSGWLSPNASHLFLGSGAIDFAGSGVVHLVGGIAGLWGSIIEGPRVGRFDAYGKPVPFRGHNASLVVLGTFLLWFGWFGFNPGSFDKILVAYPNTSDEGNWTSVGRTAVTTTLAGSTAGIVTLFSRRLLIGHWDAMDVCNGLIGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLNYDDPLEAAQLHGGCGIWGLLFTGLFAKEGFVVQTYNAGVAVKRPYGLLLGGGWGLIGAQVVEILVIFGFVSITMGPMFYALHKLKLLRIPVADELAGLDISSHGGYAYAHHEENHARSYGDYMRMQDNQS*	461

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g3679	460	TIGRFAM	amt: ammonium transporter	14	438	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Psa5g3679	460	ProSitePatterns	Ammonium transporters signature.	167	192	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Psa5g3679	460	Pfam	Ammonium Transporter Family	18	438	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Psa5g3679	460	Gene3D	Ammonium transporter AmtB like domains	3	455	IPR029020	-
	Psa5g3679	460	SUPERFAMILY	Ammonium transporter	11	419	-	-
	Psa5g3679	460	PANTHER	AMMONIUM TRANSPORTER	1	458	-	-
	Psa5g3679	460	PANTHER	AMMONIUM TRANSPORTER 1 MEMBER 3	1	458	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g3679	Psa-Chr5	289507697	289510187	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g3679	7	444	Inorganic Solute Cotransporters	AT1G64780	66.966	0.0	605

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g3679	K03320		-	pvy:116129597	791.956

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