Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3679 ATGGAGGTTTCATGGGAACAAAGTGTCACCTATTCTATCAACACAATTTACCTTCTCTTCTCTGCTTACTTAGTTTTTGTAATGCAGCTAGGATTTGCCATGATATGTGCAGGATCTGTCCGGGCCAAAAATGCTATGAACATAATGCTTACCAATGTAGTTGATGCAGTGGTAGGTAGCATCTCTTTCTATCTTTTTGGTTTCGCATTTGCTTATGGCAATTCCAACCCTTTCATTGGTACAAATTTGTTTGCTTTAGCTAATATTCCAAATGAAAATTATGATTATGGATTCTTCCTTTACCAATGGGCTTTTGCTATAGCTGTAGCAGGTATAACTAGTGGGTCCATAGCTGAGAGAACACAATTTAGTGCTTATCTTGTTTTTTCATTTTTTCTTACTGGCTTTGTGTATCCTATTGTGGCCCATTGGGTTTGGTCATCTAGTGGTTGGCTTAGTCCAAATGCAAGTCATTTGTTCTTGGGCTCAGGTGCCATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGGCATTGCTGGACTTTGGGGGTCTATTATAGAAGGTCCGCGGGTCGGGCGGTTTGATGCTTACGGAAAGCCCGTACCTTTCCGCGGCCACAATGCCTCACTTGTGGTTCTCGGGACGTTCTTGTTGTGGTTCGGTTGGTTCGGGTTTAATCCTGGTTCGTTCGACAAAATTCTCGTGGCCTACCCTAACACATCTGATGAAGGCAATTGGACATCGGTGGGCCGGACGGCCGTGACAACCACATTGGCAGGCTCGACCGCGGGGATTGTCACTTTGTTCAGCCGTCGATTATTGATTGGCCACTGGGATGCAATGGATGTATGCAACGGTTTGATTGGCGGGTTCGTCGCCATCACATCCGGGTGCTCGGTTGTTGAGCCATGGGCCGCTATTATATGCGGATTCGTCTCGGCTTGGGTGTTAATCGGGCTCAACATCTTGGCACTAAAACTAAACTATGATGATCCATTAGAGGCAGCCCAATTACATGGTGGATGTGGCATTTGGGGATTGTTGTTTACAGGGCTATTTGCCAAAGAGGGGTTTGTGGTTCAAACATATAATGCAGGGGTGGCAGTGAAAAGACCCTATGGTCTTCTACTTGGAGGTGGATGGGGATTGATTGGAGCTCAAGTGGTTGAGATTTTGGTTATCTTTGGATTTGTTAGTATAACAATGGGACCTATGTTCTATGCCTTGCACAAACTTAAGTTACTAAGAATTCCTGTGGCTGATGAACTTGCTGGTCTTGATATATCCAGCCATGGAGGCTATGCTTATGCTCATCATGAGGAAAATCATGCTCGATCTTATGGAGATTATATGCGTATGCAAGATAATCAATCGTAG 1383 0.4483 MEVSWEQSVTYSINTIYLLFSAYLVFVMQLGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTNLFALANIPNENYDYGFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLTGFVYPIVAHWVWSSSGWLSPNASHLFLGSGAIDFAGSGVVHLVGGIAGLWGSIIEGPRVGRFDAYGKPVPFRGHNASLVVLGTFLLWFGWFGFNPGSFDKILVAYPNTSDEGNWTSVGRTAVTTTLAGSTAGIVTLFSRRLLIGHWDAMDVCNGLIGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLNYDDPLEAAQLHGGCGIWGLLFTGLFAKEGFVVQTYNAGVAVKRPYGLLLGGGWGLIGAQVVEILVIFGFVSITMGPMFYALHKLKLLRIPVADELAGLDISSHGGYAYAHHEENHARSYGDYMRMQDNQS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3679 460 TIGRFAM amt: ammonium transporter 14 438 IPR001905 GO:0008519|GO:0016020|GO:0072488
Psa5g3679 460 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
Psa5g3679 460 Pfam Ammonium Transporter Family 18 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
Psa5g3679 460 Gene3D Ammonium transporter AmtB like domains 3 455 IPR029020 -
Psa5g3679 460 SUPERFAMILY Ammonium transporter 11 419 - -
Psa5g3679 460 PANTHER AMMONIUM TRANSPORTER 1 458 - -
Psa5g3679 460 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3679 Psa-Chr5 289507697 289510187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3679 7 444 Inorganic Solute Cotransporters AT1G64780 66.966 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3679 K03320 - pvy:116129597 791.956