Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3671 ATGGAGGATCTCGAGGAGGGAGAGAATGGAGAAGAAGAGGTGCTTGGTTCAAGCTTGACTATGGAGAAAGTAGCAGCTGCTAAGAAGTTCATCGAGGATCATTATAAGGCACAGATGAAGAATATCCAAGATCGGAAAGAAAGGCGTTGGATTTTGGAAAGAAAATTAGCTTCTTCAGATGTGCCAACTGAAGAACGGCTAAACCTCATCAAAGATTTAGAGAGGAAGGAAACTGAATATATGCGATTGAAAAGGCACAAAATTTGTGTGAATGATTTTGATCTCTTGACCATCATTGGAAGAGGGGCTTTTGGGGAGGTTAGGCTGTGTCGGGAGAAGAAATCTGGAAAAATCTATGCAATGAAAAAGCTGAAGAAATCTGAAATGCTTAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTATTGGCTGAAGTCGCCAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGATACTGAATACTTGTATTTAATAATGGAGTACCTGCCTGGGGGTGACATTATGACTCTGCTGATGAGGGAAGATACCTTAAGTGAAAATGTGGCTAGATTTTACATGGCACAAAGTGTTCTTGCCATAGAGTCTATTCACAAACACAATTACATTCACAGAGATATTAAGCCCGATAACCTACTTCTGGATAAAAATGGTCACATGAAGCTCTCTGATTTTGGCCTCTGTAAGCCTATCGATTGCATTACCTTGCCTACACTGCATGAGAATCAAACCATGGATGATGAAACTTTGGCTGAGCCAATGGATATCGATAGCTGTGTTCCTGATGCGAACAATCGGAAAAGCTGGAGAAGCCCGCGTGAGCAGCTTCAGCACTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACCGTGGGGACGCCAGATTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTGGGAGCGATAATGTACGAAATGCTGGTTGGTTACCCTCCATTTTACTCTGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAACCATTTAAGATTTCCAGAAGATCCCCATTTGACACTTGAGGCCAAGGATCTAATCTACAGATTGATGTGCGATGTTGATCATAGGTTAGGTACTCAAGGGGCAAATGAAATCAAGGCTCATCCATGGTTCAAGGGTGTAGATTGGGATAGACTTTATGAAATGGATGCAGCATTTAAACCACAAGTTAATGGGGAACTGGATACCCAAAACTTCATGAAGTTTGATGAGGTAGAACCACCAGATGCAACAAGAGCCGGGTCCGGATCTTCAAGAAAGATGCTTCTAACTCCCAAAGATCTAAACTTTGTTGGTTATACTTACAAAAACTTCGATGCTGTAAAAGAAGGCCTTCGCCAGTCTTTGAGTGAGTCCATGCAAGATTATGCTTCCAAACGGACAGCTGATGAAACAGGCTTGCAAATGCTCGCGTCGTCTGGAGACCCTATGTTACCATGA 1527 0.4244 MEDLEEGENGEEEVLGSSLTMEKVAAAKKFIEDHYKAQMKNIQDRKERRWILERKLASSDVPTEERLNLIKDLERKETEYMRLKRHKICVNDFDLLTIIGRGAFGEVRLCREKKSGKIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDIMTLLMREDTLSENVARFYMAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPIDCITLPTLHENQTMDDETLAEPMDIDSCVPDANNRKSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDPHLTLEAKDLIYRLMCDVDHRLGTQGANEIKAHPWFKGVDWDRLYEMDAAFKPQVNGELDTQNFMKFDEVEPPDATRAGSGSSRKMLLTPKDLNFVGYTYKNFDAVKEGLRQSLSESMQDYASKRTADETGLQMLASSGDPMLP* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3671 508 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 13 486 - -
Psa5g3671 508 Gene3D Transferase(Phosphotransferase) domain 1 179 417 - -
Psa5g3671 508 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3671 508 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3671 508 Pfam Protein kinase domain 95 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3671 508 Pfam Protein kinase C terminal domain 419 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
Psa5g3671 508 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa5g3671 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Psa5g3671 508 CDD STKc_NDR_like 91 465 - -
Psa5g3671 508 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 486 - -
Psa5g3671 508 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Psa5g3671 508 Gene3D Phosphorylase Kinase; domain 1 84 178 - -
Psa5g3671 508 SMART pkinase_C_6 401 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa5g3671 508 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3671 508 SUPERFAMILY Protein kinase-like (PK-like) 76 446 IPR011009 -
Psa5g3671 508 MobiDBLite consensus disorder prediction 489 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3671 Psa-Chr5 289122681 289131237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3671 1 507 AGC Kinase Gene Family AT4G33080 78.782 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa5g3671 Pkinase 6.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3671 K08790 - gmx:100815717 935.25