Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3650 ATGAGAGAAGGTTGGAGATTCATAACGTTCTTCTGCATGGTTTTAGTAATTGGGGTGATGGTGTTTATCCCTTTGATTCATAGAGAAAGAATGATCGATACATGCTTTTGGTTTGGAGTTGAATATTGCTCTCATGGAGGAAATGTTGTGGACTTACACATTGGCCAACAAAGGAATATACCATTCAGTAGAAAACTTACACAAACATCAAATTCTGCTAACTCACACAAAACCAACATTGGTGATCATAAAAACACTCCTTCACCATCATCATCACCACTTTCTAGACATATTTCACCATCATCTTCACTACTTTCCATATCAGAAACTCCCTCAATTTCACCATCACCAATAACATCACCAGAACTTTCCCCTTCACCTTCACCATCACCTTCATCTGCGGTAGAACTAACAACTTCACACTTACCACTTACATCAAATCCACCTACACTTATGTCCACACCACAAATTTCTAATTGGATTTCAGCAGCTTCTCCTTCTCCATCTTCAAACCAACGAAATCCAAACAGTTCAAACCGAAAGCAACATTCTGTCATTATATGGTCAACACTTGGAGGATTTTCCTTCCTTGTTTTGGTGTCATGCACTGTTTTCATTTGCTTCAGAAGTAGTAAGGTTGTAACTGTCAAACCTTGGACCACAGGGTTAAGTGGCCAGCTTCGAAAAGCGTTCATAACAGGTATTCCGAGTCTTAAACGAGCCGAACTCGTTGTAGCTTGTGAAGATTTCAGCAACATTATTGGTTCACTTGAAGACGAGACTATCTATAAGGGAACTCTTTCAAGTGGAGTTGAGATAGCTGTAGTATCTTCTGCAGTGGCTTCTTCCAAAGAATGGTCGAAAAAATTTCAAGCTCAGTTCAGAAAGAAGATTGAGACGTTATCGAGAGTGAACCACAAGAATTTCGTGAATCTTATTGGCTATTGCGAAGAGAATATACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACATTGTTTGAGCATCTACATATTAGAGAAGCAGAACAACTCGACTGGAGAATGAGAACGAGGATAGCTATGGGAATATCTTACTGTCTAGACCATATACATCAACTCACACCACCAATTGCGCACAAAAACTTGTTATCTTCCTCTATATATCTAACAGAAGATTATGCTGCTAAAATATCAGACCTTAGTTTCTGCACCGACGAGGTTGATACAAAGAAGGGTTCTGAGAAAATATCAGCAGAAGAAATAAAGGACAATGTTTATAGTTTTGGCGTAATTTTGTTCGAACTGATAACAGGAAAAATTCCATATGCGGTAGAAAACGGCTTTGCAACAGATTGGGCTGCAGAATATATAAGAGGACAACCTTTGAGAGAGTTGGTGGATACAAACTTGAAATCTTTGAAAGATGATGAAATTGAGAAATGGTCAGAAGTGATTAACAATTGCGTAGATCCTGATCCAGAGAAAAGGCCATCGATGAAAGAGGTTACGACTAAGTTGAAGGAAATCACTTCTATGGAGCCTGATGGAGCGACGCCAAAATCATCCCCTCTTTGGTGGGCCGAAATTGAAATCATGACCTCAGACTTATGTTGA 1605 0.3919 MREGWRFITFFCMVLVIGVMVFIPLIHRERMIDTCFWFGVEYCSHGGNVVDLHIGQQRNIPFSRKLTQTSNSANSHKTNIGDHKNTPSPSSSPLSRHISPSSSLLSISETPSISPSPITSPELSPSPSPSPSSAVELTTSHLPLTSNPPTLMSTPQISNWISAASPSPSSNQRNPNSSNRKQHSVIIWSTLGGFSFLVLVSCTVFICFRSSKVVTVKPWTTGLSGQLRKAFITGIPSLKRAELVVACEDFSNIIGSLEDETIYKGTLSSGVEIAVVSSAVASSKEWSKKFQAQFRKKIETLSRVNHKNFVNLIGYCEENIPFTRMMVFEYAPNGTLFEHLHIREAEQLDWRMRTRIAMGISYCLDHIHQLTPPIAHKNLLSSSIYLTEDYAAKISDLSFCTDEVDTKKGSEKISAEEIKDNVYSFGVILFELITGKIPYAVENGFATDWAAEYIRGQPLRELVDTNLKSLKDDEIEKWSEVINNCVDPDPEKRPSMKEVTTKLKEITSMEPDGATPKSSPLWWAEIEIMTSDLC* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3650 534 MobiDBLite consensus disorder prediction 115 138 - -
Psa5g3650 534 Pfam Protein tyrosine and serine/threonine kinase 254 503 IPR001245 GO:0004672|GO:0006468
Psa5g3650 534 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 93 531 - -
Psa5g3650 534 Gene3D Transferase(Phosphotransferase) domain 1 331 517 - -
Psa5g3650 534 SUPERFAMILY Protein kinase-like (PK-like) 234 503 IPR011009 -
Psa5g3650 534 MobiDBLite consensus disorder prediction 63 96 - -
Psa5g3650 534 ProSiteProfiles Protein kinase domain profile. 248 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3650 534 PANTHER PROTEIN MALE DISCOVERER 2 93 531 - -
Psa5g3650 534 Gene3D Phosphorylase Kinase; domain 1 225 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3650 Psa-Chr5 287785144 287795079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3650 230 510 Receptor kinase-like Gene Family AT1G67720 33.553 1.77e-35 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Psa5g3650 PK_Tyr_Ser-Thr 1.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3650 - - gmx:100814122 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3650 5 287785144 287795079 Psa5g3650 5 287785144 287795079 ECH