Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3647 ATGGCTGTAGAGCAAGGTGATAGATATTCCTCCATTGAAGCACCACTTTTGAATGATGAAAAAGTGAATGATGGAAACACTACTACTACTACTAAGGATCAACAACACCTCACGGTTCATCATGTGGCTAACGCTTCTTCATTCAAGACTTGCTTCCATCTACTCAATGCTATCTCAGGAGTCGGCATTGTTTCTATACCATATGCCCTAGCATCAGGAGGATGGGTAAGCATATTTCTGCTATTTACAATAGCCCTAGCATGCTGTTACACAGGTACATTGGTTAAGAAATGCATGGACATGGATCCTAATATCAGAACCTTTCCAGACATAGGACAACATGCATTTGGATCGAAAGGAAGGTTAATCGTATCGATAATCATGAACTCCGAACTGTACTTAGCAGTAACAGGTTTTCTAATTTTAGAAGGGGACAATCTAAACAAACTGATACCGAATGTGGAAATTCATATAGGAGAGTTGAGTATTGGTGGGACAACAATGTTTACTATGGTTACTTGTCTGGTTATTTTGCCTACTGTTTTGTTTGAGGATATGAGTTTGTTGTCTTATGTTTCTGCCGGTGGTGCTTTGGCTTCTTCGATTTTCATTGTTTCGTTGTTGTGGAACGGTGCGATCGATGGAACTGGTTTTCATGGAAAAGGAAGGGTTTTTAATTGGAGTGGAGTTCCTTCTGCTGTTAGTTTGTATGCTTTTTGTTATAGTGCTCATCCTGTTCTTCCTACTCTCTACAATTCTATGAGGAACAAAACTCATTTCTCTGGGGTACTAATTGTAAGCTTTTCAGCATGCACATTTGGTTACGCCGCCGCAGCAATTCTAGGCTACTTAATGTTCGGACAGGAAGTCGAATCGCAAGTAACTCTAAATCTCCAAACAGGAAAGTTAAGTTCAAGAGTAGCAATATACACAACCCTAGTGAATCCAATAGCAAAATATGCATTAATGCTTACACCAGTAATAAATGCAATAAAAATGAAGGTTTCATGCAACAAAAGGGTCACACATATGATTATTAGTACATCTTTACTAGTAAGTTCTCTCATTATAGCAGTCACAATTCCTTTATTTGGATACCTTATGTCACTTGTTGGAGCATTGTTAAGTGTTTCAGCTTCAATTTTAGTGCCATCCATTTGTTACTTGAAGATTTCTGGAGATTACAAGAGATTTGGAAGTGGAATGATTATTAATTATTCTATAATTGTAATGGGAGTTGCTATTGCTGTTTTTGGTACTTATAGATCTCTTATAGATATAATTCAGAATTTGTAA 1296 0.3735 MAVEQGDRYSSIEAPLLNDEKVNDGNTTTTTKDQQHLTVHHVANASSFKTCFHLLNAISGVGIVSIPYALASGGWVSIFLLFTIALACCYTGTLVKKCMDMDPNIRTFPDIGQHAFGSKGRLIVSIIMNSELYLAVTGFLILEGDNLNKLIPNVEIHIGELSIGGTTMFTMVTCLVILPTVLFEDMSLLSYVSAGGALASSIFIVSLLWNGAIDGTGFHGKGRVFNWSGVPSAVSLYAFCYSAHPVLPTLYNSMRNKTHFSGVLIVSFSACTFGYAAAAILGYLMFGQEVESQVTLNLQTGKLSSRVAIYTTLVNPIAKYALMLTPVINAIKMKVSCNKRVTHMIISTSLLVSSLIIAVTIPLFGYLMSLVGALLSVSASILVPSICYLKISGDYKRFGSGMIINYSIIVMGVAIAVFGTYRSLIDIIQNL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3647 431 PANTHER OS05G0424000 PROTEIN-RELATED 1 429 - -
Psa5g3647 431 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 429 - -
Psa5g3647 431 Pfam Transmembrane amino acid transporter protein 44 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3647 Psa-Chr5 287747930 287750982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3647 32 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.750 2.89e-152 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3647 K15015 - gmx:100784690 613.994