Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3640 ATGCAATCACAATCTAACTCACCCATCAAACCAATGAACTCCCTCACTCAAATCTTCCAAAACATTTTCTCAGATAACAGCAACATCATGCTTGCTGCCATCATTTCTCTACTACTAGTCATTCTCTTTGTTCTCCTTCTTCATCTTTATGCCAAATGGTTCTTAGCTCAAGCACATGCTCAAGCTCAAGCTCGCCGCCGACGTCGCCGGAGAACAACTGTAACCGTCTCTGATGTCCTTGGACCTGCAAGGTTCCATCACTTCCACAGCTTCAACATTGAGGACTCGCCTCTATCTAGCTCACACACCAAAGGTCTTGATTCTTCCATCATTGCCTCAATTCCTTTGTTCATTTATACACAAACGAATGAAAGTGAGCAAGAAGAAAAACTTGAATGTGTGATTTGTTTGAGCGGTTTTGAAAATGGTGAAATGGGAAGGTGTTTACCGAAATGTGGACATGGTTTTCATGTGGAGTGTATTGATATGTGGTTGAGTTCACATTCCAATTGTCCAATTTGTAGAGCTTCAATTGTTATTCTACAGAATGAAGATTCTTCAGGTGTTGTTGATGATTCTTGTTCTGTTGAAATTGTGATTGATGGAAGTTCTAGCTCTGAGATTAGAGAGAATGAACAAGGGAATGACAATGATAATGGAACTGGAAGGGAGAAGTTGGTGAATGAAGAATTGGATTGGGTTGGGGATGGTGGCACCTGCTCACGCATGCTGCAGTAG 738 0.416 MQSQSNSPIKPMNSLTQIFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAHAQAQARRRRRRRTTVTVSDVLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIASIPLFIYTQTNESEQEEKLECVICLSGFENGEMGRCLPKCGHGFHVECIDMWLSSHSNCPICRASIVILQNEDSSGVVDDSCSVEIVIDGSSSSEIRENEQGNDNDNGTGREKLVNEELDWVGDGGTCSRMLQ* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3640 245 SUPERFAMILY RING/U-box 122 181 - -
Psa5g3640 245 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 216 IPR044675 -
Psa5g3640 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 180 IPR013083 -
Psa5g3640 245 PANTHER - 7 216 - -
Psa5g3640 245 Pfam Ring finger domain 132 175 IPR001841 -
Psa5g3640 245 CDD RING-H2_EL5_like 132 175 - -
Psa5g3640 245 SMART ring_2 133 174 IPR001841 -
Psa5g3640 245 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Psa5g3640 245 MobiDBLite consensus disorder prediction 205 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3640 Psa-Chr5 286878133 286879315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3640 21 230 Rapid Response to Elicitors AT3G16720 33.945 2.41e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3640 - - lang:109329145 261.922