Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3613 ATGGCTTCAGCATTGGAATGTTGGTCGAGACGTGGCGGCAACAACAACAACAACGACGAAGACATGGTAGAACAAGTCCTCATGGAAACCAACCACCAATCTTCACAATCACAACACAACAACAAAGACTCTTCCGTTATTCACAAGAAGTTCAACAAACTCACTCGCAATGTTTCTGAAGCTATTGCTTCCCTTAAAAACACCCTCAATATCAACCTTAACATTGATTCTTCCAAACCTGACAACAACAACAACAACAGCAGCAACACTTCTCGTACTAGCAACAATCTCGTTTGGGGAACAGTTGTTCGAAACTTAACTCAGCTTTATCCTGGTAGCCAGCTTCCTGAGAAGCTTATGTCCAACATTCGTAAACACTATGATTCCTTGCCTCCTAGTTATTCTCAGGCGGGATTTGATGTTAAAGATGTGTTTCTTCACATCAAGTTAATGGAGCAAGCTTTGGAAGATTCACAGGCTGCGATTTTGATTGATGAGGAGTATGATGGTGAGATGCCGCTTCAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCGATTTCATGGCCTGCAATGTCGAGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAAGATTCAGATCTTCGAGAAGAAAGGCCTCACCCTTGGAATTGTACTTCTACTTGTTCTTTCAGGGGCTGGTCAAGATAACTTGGTAAGGACCCGGGTTGAAAGTGCTCTCAAGTTTGCCATGAAGAAGCCTAAAGCTAGTGTTGTGAAGCTTCCTTTTGGGCTTTGCGGATGTCAAGAGGAGAATTTCAAGGGGAGAGAAGTCGGAGAGATTGAAGAAGATTGCAGCAGTGTATACTGTGAAAATTCAAGCCAAAAGATTCAGCTTGAAATGCCCTTGCCTAATTCATCGTTTCACGTATCGGTAGACGAGTGGCAGACTATTCAGATAGATGCAGATGAGATGCAAAAATGGTTATTGAACTCGGATAGTCTAGAGTTTTTGGAACAGATCGGACACAATTCGTATAGAGGTGCCTACATGGGGAAAAAGGTTGGCATTGAGAAGCTTAGAGGGTGTGACAAAGGAAACTTGTACGAGTTTGCGCTTAGGAAAGATCTGCTAGAACTGATGACATGTGGACATAAAAACATTTTGCAGTTTTGCGGTGTTTGTGTAGATGACAATCACGGGTTATGTGTAGTGACAAAATTCATGGAAGGTGGATCTGTCCATGACTTAATTTCAAAGAACAAGAAGCTTCAGAGCAAGGATATTGTAAGAATTGCAGTTGATGTGGCTGAGGGGATCAAGTTTATGAACGATCACGGTGCTGCATATAGAGACCTTAATACTCAGAGGATTCTGTTGGATAAACATGGGAGTGCTTGCTTGGGAGATTTGGGTATAGTCACTGCCTGCAAGAGTAACCAAGAGGCAATGGACTATGAAACCGACGGGTACCGATGGCTAGCTCCTGAGATAATCGCTGGCGACCCGGAGAGTGTCACCGAGACATGGATGAGTAATGTTTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACCGGTGAAGCAGCCTATAATGCATATTCACCCGTGCAGGCAGCAGTAGGCATTGCTGCCTGTGGCCTTAGACCTGAGATCCCAAAGGAATGTCCACAAACTCTAAAATCTCTAATGACAAAATGCTGGAACAATACCCCTTCAAAACGCCCCGAATTCTCCGAAATTTTAGCGATATTGCTGCGAGCAACCAAACAACAACAATAG 1770 0.4362 MASALECWSRRGGNNNNNDEDMVEQVLMETNHQSSQSQHNNKDSSVIHKKFNKLTRNVSEAIASLKNTLNINLNIDSSKPDNNNNNSSNTSRTSNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPPSYSQAGFDVKDVFLHIKLMEQALEDSQAAILIDEEYDGEMPLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGLTLGIVLLLVLSGAGQDNLVRTRVESALKFAMKKPKASVVKLPFGLCGCQEENFKGREVGEIEEDCSSVYCENSSQKIQLEMPLPNSSFHVSVDEWQTIQIDADEMQKWLLNSDSLEFLEQIGHNSYRGAYMGKKVGIEKLRGCDKGNLYEFALRKDLLELMTCGHKNILQFCGVCVDDNHGLCVVTKFMEGGSVHDLISKNKKLQSKDIVRIAVDVAEGIKFMNDHGAAYRDLNTQRILLDKHGSACLGDLGIVTACKSNQEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYNAYSPVQAAVGIAACGLRPEIPKECPQTLKSLMTKCWNNTPSKRPEFSEILAILLRATKQQQ* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3613 589 Gene3D Transferase(Phosphotransferase) domain 1 324 587 - -
Psa5g3613 589 ProSiteProfiles Protein kinase domain profile. 331 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3613 589 PANTHER SERINE-THREONINE PROTEIN KINASE 1 585 - -
Psa5g3613 589 Pfam Protein tyrosine and serine/threonine kinase 370 580 IPR001245 GO:0004672|GO:0006468
Psa5g3613 589 PRINTS Tyrosine kinase catalytic domain signature 402 415 IPR001245 GO:0004672|GO:0006468
Psa5g3613 589 PRINTS Tyrosine kinase catalytic domain signature 438 456 IPR001245 GO:0004672|GO:0006468
Psa5g3613 589 PRINTS Tyrosine kinase catalytic domain signature 508 530 IPR001245 GO:0004672|GO:0006468
Psa5g3613 589 PRINTS Tyrosine kinase catalytic domain signature 552 574 IPR001245 GO:0004672|GO:0006468
Psa5g3613 589 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 585 - -
Psa5g3613 589 SUPERFAMILY Protein kinase-like (PK-like) 304 581 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3613 Psa-Chr5 284190610 284194080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3613 314 587 MAP Kinase Kinase Kinase AT2G17700 34.859 1.70e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Psa5g3613 PK_Tyr_Ser-Thr 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3613 - - gmx:100811417 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3613 5 284190610 284194080 Psa5g3613 5 284190610 284194080 ECH
Psa5g3613 5 284190610 284194080 Psa2g1282 2 97289250 97292978 PCT