Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3607 ATGTCTTGCTCCGTTGTCGTTTCAAGTCCTAATGTCTTCTCTCTCCCCTCTCCTTGCCATTTCTCTCTCTCCTCACCGGTTTTGAAGAGAAAGAGGCCGGCTAAGCTTCATATACCTGTTGCTTCTCTAACTATTGAACTCCCGCCGGCGGTAATTACTCCGGCACCGGAGAAGGATGTTGTTGAGGTAGAGGGGAATGGTTTTTCTGTGTACTGTAAGAGAGGAAGTAGGAAACACATGGAGGATCGTTATTCTGCTTCTGATGATCTTTACGAAGAAACAAAACAGGCTTTTTTTGGCATATTTGATGGACATGGAGGTACAAAAGCTTCCGAATTCGCAGCAGATAACATGGAGAAGAATGTGTTAGAAGAAATAACCAGAAGAGATGAGAGTGATATTGAGGAAGCAGTGAAACATGGCTACCTCAAAACGGATTCAGATTTCTTAAAAGAGGATCTTCACGGTGGTTCTTGCTGTGTAACAGCATTGATCAAGAACGGTAATCTTATCGTGTCCAATGCCGGCGATTGTCGCGCTGTTATCAGCAGTAGAGGTGTTGCTGAGGCCTTAACATCTGATCACAAACCTTCGAGAAACGATGAAAAAGACAGGATTGAAACTCAGGGTGGCTATGTTGATATGTGCCGCGGCGTGTGGAGAATCCAAGGCTCTCTTGCTGTTTCTAGGAGCATTGGAGATAGACACATGAAACAATGGGTGATAGCGGAACCTGAGACTAAAGTTCTCAGAATTGAACCTCATCATGAGTTGTTAATCCTAGCTTCAGATGGATTATGGGACAAGGTTAGTAATCAGGAAGCAGTAGACATAGCTCATCCTTTTTGTGTAGGGAACAATAAACAAGGACCCTTTCAAGCTTGTAAGAAGCTTGTCGATTTATCAGCATCGCGAGGCTCTAGCGATGATACAAGTGTTATGATCATCAAATTACAGAAATATATTTGA 969 0.4324 MSCSVVVSSPNVFSLPSPCHFSLSSPVLKRKRPAKLHIPVASLTIELPPAVITPAPEKDVVEVEGNGFSVYCKRGSRKHMEDRYSASDDLYEETKQAFFGIFDGHGGTKASEFAADNMEKNVLEEITRRDESDIEEAVKHGYLKTDSDFLKEDLHGGSCCVTALIKNGNLIVSNAGDCRAVISSRGVAEALTSDHKPSRNDEKDRIETQGGYVDMCRGVWRIQGSLAVSRSIGDRHMKQWVIAEPETKVLRIEPHHELLILASDGLWDKVSNQEAVDIAHPFCVGNNKQGPFQACKKLVDLSASRGSSDDTSVMIIKLQKYI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3607 322 ProSiteProfiles PPM-type phosphatase domain profile. 67 318 IPR001932 -
Psa5g3607 322 PANTHER PROTEIN PHOSPHATASE 2C 16 321 IPR015655 GO:0004722|GO:0006470
Psa5g3607 322 Pfam Protein phosphatase 2C 68 310 IPR001932 -
Psa5g3607 322 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Psa5g3607 322 SMART PP2C_4 60 316 IPR001932 -
Psa5g3607 322 CDD PP2Cc 66 318 IPR001932 -
Psa5g3607 322 Gene3D - 66 321 IPR036457 -
Psa5g3607 322 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 16 321 - -
Psa5g3607 322 SUPERFAMILY PP2C-like 67 319 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3607 Psa-Chr5 283891105 283892971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3607 10 322 PP2C-type Phosphatase Gene Family AT2G30020 63.415 6.97e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3607 K17506 - gmx:100818903 486.878