Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3589 ATGCAAACTACCTTAGAGGCAATCATGTTACATCGGACAAAAGGCTCACTTCTTGATGGCGAGCCTATTATATCTTTGCCACCTAAATCTGTGGAGTTGAAAAGAGTGAAATTTTCACAGGAGGAACGAGATTTCTATTCAAAGCTAGAGGCCGATTCACGTGCACAGTTTCAGGAATATGTTGATGCTGGCTCTAGTTTGGATCACAGTGATGATTTGGATGATGACTTTGGGGACTTTAAGGATGCTTCACCTGAGACCACACTGACTCAAGAATCTGCACAAAACACGTCTCTTAATTATCCAACAGAAGTCACTTGA 321 0.4174 MQTTLEAIMLHRTKGSLLDGEPIISLPPKSVELKRVKFSQEERDFYSKLEADSRAQFQEYVDAGSSLDHSDDLDDDFGDFKDASPETTLTQESAQNTSLNYPTEVT* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3589 106 MobiDBLite consensus disorder prediction 65 82 - -
Psa5g3589 106 MobiDBLite consensus disorder prediction 62 106 - -
Psa5g3589 106 MobiDBLite consensus disorder prediction 84 106 - -
Psa5g3589 106 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 65 - -
Psa5g3589 106 PANTHER BNAA01G36010D PROTEIN 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3589 Psa-Chr5 282840065 282840465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3589 1 65 RAD5 or RAD16-like Gene Family AT1G61140 69.231 1.61e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3589 - - gmx:100792901 112.464