Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3586 ATGGCCTTCAAGAACTTCTCCTATATACTTTCCATGATCTTGTTCTTTGTATCATTGTGTGTAGCAAATGGTGCTCCACCAGAAACCATTTGCAACTCTCTTGTAAATCCTACTTATTGTAAAACCGTTATTGGTAATCAAAATGGAAACATCTATGACTACGGTCGCATTTCGATTCAAAAATCGTTATCACAATCGCGTAAGTTCATGAACTTATTGGATTCGTATCTTCAAGGTAGCTCGCCTTTGTCTCAATCCATGATTCACGCTCTCGAAGATTGTCGATTCCTTGCAAGCCTGAGTTTTGAATACTTATCAAACACCTATGCCATAACAAATACATACAGTAATGTTCTTCCAACTTCTCAAGCAGAAGATTTTGAAACGTTCCTTAGTGCAGTTTTGACTAACCAACAAACATGTTTGGATGGTCTAAACACTATAGCTTCTTCTGAACAGAGAGTGAAGAACGATTTGTCGTTATCACTCTCCGATGAGATAAAGCTTCATAGTGTAACCCTAGCTTTGTTCTTGAAGGGTTGGATGCCTGAGAAAAAAATAAGAACATCATGGCCACAAAATGCTAAACATTTGAACTTCAAAAATGGTCGTTTACCATTTAAGATGTCAAATAAGGCACGCACTATTTATGATTCAGCCAGACGCCATGGGCGAAAACTACTTCAAACTGATGAAGATAGTGTTGTGGTAAGAGATATTGTTGTTGTTAGTCAAGATGGAAGTGGAAACTTTAGCACTATCAATGAAGCAATAGCCGCTGCACCAAATAATACAGTTGCTAGTGATGGATACTTTCTCATTTTTATCACTAAAGGTGTGTATCAAGAGTATGTATCTATTGACAAAAAGAAGAAGTACTTGATGATGATTGGAGAAGGAATCAATCAAACAGTTATCACAGGCAATCACAATGTTGATGATGGTTTCACAACATTCAATTCAGCCACATTTGCTGTGGTAGGTCAAGGGTTTGTGGCAGTTAATATAACATTTCGCAACACGGCCGGACCTGGAAAACATCAAGCAGTTGCAATGAGAAGTGGAGCAGACATGTCCACATTCTACAGTTGCAGCTTTGAAGGGTATCAAGACACACTCTACACACATTCTTTGAGGCAATTCTATAGAGAATGTGATATCTATGGAACAGTTGACTTCATATTTGGAAATGCTGCAGTTGTTTTACAAAACTGCAACATCTATCCTCGTCTTCCTCTTAATGGACAATTCAATGCCATCACAGCGCAAGGCCGAACCGATCCAAATCAAAACACAGGAACTTCTATACAAAATGCAACTATTAAAGCAGCAGATGATTTGGCTCCTAATGTTGGGACAGTTCAAACATATTTAGGGAGGCCATGGAAGCAATATTCAAGGACGGTATTTATGCAATCATTCATGGATAGTTTCATAAACCCTTCTGGTTGGCATATATGGGATGGTGAATTTGCATTGAGTACGCTGTATTATGCAGAATATGATAATAGAGGAGGTGGTTCAAGCACTGCAAATAGAGTGACATGGTCTGGTTACCATGTTATTAATGCTACTGATGCAGCAAATTTCACAGTCTCTAATTTTGTGAGTGGTGATGATTGGATTCCTCAAACATGTGTTCCATACTTGACTGGATTGATATAG 1665 0.3838 MAFKNFSYILSMILFFVSLCVANGAPPETICNSLVNPTYCKTVIGNQNGNIYDYGRISIQKSLSQSRKFMNLLDSYLQGSSPLSQSMIHALEDCRFLASLSFEYLSNTYAITNTYSNVLPTSQAEDFETFLSAVLTNQQTCLDGLNTIASSEQRVKNDLSLSLSDEIKLHSVTLALFLKGWMPEKKIRTSWPQNAKHLNFKNGRLPFKMSNKARTIYDSARRHGRKLLQTDEDSVVVRDIVVVSQDGSGNFSTINEAIAAAPNNTVASDGYFLIFITKGVYQEYVSIDKKKKYLMMIGEGINQTVITGNHNVDDGFTTFNSATFAVVGQGFVAVNITFRNTAGPGKHQAVAMRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLNGQFNAITAQGRTDPNQNTGTSIQNATIKAADDLAPNVGTVQTYLGRPWKQYSRTVFMQSFMDSFINPSGWHIWDGEFALSTLYYAEYDNRGGGSSTANRVTWSGYHVINATDAANFTVSNFVSGDDWIPQTCVPYLTGLI* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3586 554 PANTHER PECTINESTERASE 10 552 - -
Psa5g3586 554 SUPERFAMILY Pectin lyase-like 237 551 IPR011050 -
Psa5g3586 554 Pfam Pectinesterase 241 539 IPR000070 GO:0030599|GO:0042545
Psa5g3586 554 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Psa5g3586 554 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 10 552 - -
Psa5g3586 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 177 IPR035513 -
Psa5g3586 554 Pfam Plant invertase/pectin methylesterase inhibitor 28 157 IPR006501 GO:0004857
Psa5g3586 554 Gene3D - 235 553 IPR012334 -
Psa5g3586 554 CDD PMEI-like_3 29 181 - -
Psa5g3586 554 SMART PMEI_2 22 176 IPR006501 GO:0004857
Psa5g3586 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 179 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3586 Psa-Chr5 280514718 280516642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3586 14 554 Carbohydrate Esterase AT4G02330 59.425 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3586 K01051 - gmx:100813051 859.751