Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3584 ATGGCCGATGATATCCTCCCAATATTCTCTAACTTCGACGGTAGATTCTCTAAAGAGAAACTACCGACGAAGGTGCAGGGAATGATTCCATACGCTACGCTGCACTTGAACAAAACTATTAACTCTCTCGACCGCCATGTTCCGTGCGAGGAAGAGTTTCGATCACTCATGGAACTCGGAGGCGAGTCGTTTGACTTGACTCGGAGTAAGGAGAAGTCAACTCAGAACGGGAACTCACTGTATGACTCGAACGACGAGGAGGAGGATGAAGGAAAAGTTGACGGTGAAGAGGACTTGATTCCGGTGGCGAAGGCGGTTGTTGATTACAACGTGGTGATAGACGCGCTTCCGCCGGCGACGGTTAACGGTCTCAGGGAAATCGCGAACGTCTGTCGTGGATCGGCGATTCAGTTGCTGAATTTCGCTGATGCTGTAGCCATTGGTAGTCGCACGCCGAGCGGTTGTTTAGAGATCCTTGACGTGTTTGAGACATTGCGTGACCTAATTCCCGAGTTTGAAGCATTGTTCTCTGATCAGTATTGCTCGTTCCTTGTAAATGAAGCTATCACATTTGGAAGAGAAGCTCGTGGACAAGTTGCTAGGATTTCTGAAGGTGGAAACACTGGCTGCAAAGCCAATGAAGGAGAAACTAAGATGTTCAATCTTCATTTTGAAGAGATATGCCGGGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTCAGGGAAGAATTAAGGATCTCAGTTGAAAAGCTCTTGTTGCCTGCATATGGAAGCTTTATTGGAAGGTTTCAAATTATTCCGGAGCTTGCTAAGAATGGGAAGAATTGGATCAAATGGTGGCCGAAAGTGAAGGTTCCCATTGGTGATTTTCTTCAACTGTTCCATTGTATATTAAGAGTACCACTGGCATCAGGGCGAGTGGTTGGGGGCATAGTGCATGTTCAAATTGGAATTAGAGGGTTGGCACAGGGATTTGGAGTGGTGAATGACTTGATGGTTATGTCAGGAAACGTAAACGTAACAGTTGCCAGCCATATTCAGCGTATGTTTGGTGTAACGGTTTTGCTAGTGAAACTGGTTTTGTTCAAGTNGGATCTCTATTATAGGCAATTATAG 1119 0.4567 MADDILPIFSNFDGRFSKEKLPTKVQGMIPYATLHLNKTINSLDRHVPCEEEFRSLMELGGESFDLTRSKEKSTQNGNSLYDSNDEEEDEGKVDGEEDLIPVAKAVVDYNVVIDALPPATVNGLREIANVCRGSAIQLLNFADAVAIGSRTPSGCLEILDVFETLRDLIPEFEALFSDQYCSFLVNEAITFGREARGQVARISEGGNTGCKANEGETKMFNLHFEEICRVQSQWFVFDEQLREELRISVEKLLLPAYGSFIGRFQIIPELAKNGKNWIKWWPKVKVPIGDFLQLFHCILRVPLASGRVVGGIVHVQIGIRGLAQGFGVVNDLMVMSGNVNVTVASHIQRMFGVTVLLVKLVLFKXDLYYRQL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3584 372 SUPERFAMILY Cullin repeat-like 217 282 IPR016159 -
Psa5g3584 372 Gene3D Exocyst complex component Exo70 203 284 - -
Psa5g3584 372 MobiDBLite consensus disorder prediction 66 95 - -
Psa5g3584 372 PANTHER EXOCYST COMPLEX PROTEIN EXO70 129 193 IPR004140 GO:0000145|GO:0006887
Psa5g3584 372 PANTHER EXOCYST COMPLEX PROTEIN EXO70 211 279 IPR004140 GO:0000145|GO:0006887
Psa5g3584 372 Pfam Exo70 exocyst complex subunit 217 267 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa5g3584 372 Pfam Exo70 exocyst complex subunit 128 189 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa5g3584 372 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 129 193 - -
Psa5g3584 372 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 211 279 - -
Psa5g3584 372 SUPERFAMILY Cullin repeat-like 109 185 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3584 Psa-Chr5 280082032 280084644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3584 1 47 EXO70 exocyst subunit family AT5G58430 51.064 1.01e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3584 K07195 - ahf:112719926 103.99