Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3583 ATGTCTGAAAACGGTGAAGAGAAATTACTCGCTGTGGCGCGCCACATAGCAAAAACGCTAGGCCACAACAACAACAACATGGCCGATGATATCCTCCAAATATTCTCTAACTTCGACGGTAGATTCTCTAAAGAGAAACTATCCGACGAAGGTGCAGGGAATGATTCCATACGCTACGCTGCACTTGAACAAACTATTAACTCTCTCGACCGTCAGATTTCGAATCATCTTTCGTCGGAAGATTTCATCTGTTATAATTCCGCCGCCTTTCTTGCTGCCGTTGACGAGCTTGTTTCCGTTATTGAAGACTGGAGTCCTCTCTCTGATGATAAGACCGTCAACGCGTGTCTTGTACGCGCCGATGATATACTTCAGCAGGCCATGTTCCGTGCGGAGGAAGAGTTTCGATCACTCATGGAACTCGGAGGCGAGTCGTTTGACTTGACTCGGAGTAAGGAGAAGTCAACTCAGAACGGGAACTCACTGTATGACTCGAACGACGAGGAGGAGGATGAAGGAGAAGTTGACGGTGAAGAGGACTTGATTCCGGTGGCGAAGGCGGTTGTTGATTACAACGTGGTGATAGACGCGCTTCCGCCGGCGACGGTTAACGGTCTCAGGGAAATCGCGAAACGTATGCTTGCGGCGGGGTTTGGGAAGGAGTGCTCGCACGTGTACGGAGGTTGCAGGAGGGAGTTCTTGGAAGAGAGTTTGTCGAGGTTAGGGTTACAGAAACTGAGCATTTCAGAGGTTCATAAGATGCCATGGCAGGAGCTTGAAGACGAGATTGAGCGATGGATTAAAGCCTCTAACGTTGCTCTTAAAATCCTCTTCCCAAGCGAGCGGCGACTCGGTGATCGTGTTTTCTCCGGTTTGTCTTCTTCATCCGCTGTCGCTGATCTCTCCTTCATGGAGGTCTGTCGTGGATCGGCGATTCAGTTGCTGAATTTCGCTGATGCTGTAGCCATTGGTAGTCGCACGCCGGAGCGGTTGTTTAGAGTCCTTGACGTGTTTGAGACATTGCGTGACCTAATTCCCGAGTTTGAAGCATTGTTCTCTGATCAGTATTGCTCGTTCCTTGTAAATGAAGCTATCACAATTTGGAAGAGGTTAGGAGAAGCAATAAGCGGGATTTTCATCGAACTTGAGAATCTGATTAGCCGTGATCCTGTGAAGGCGGTTGTTCCCGGTGGTGGTCTGCATCCCATCACTCGCTACGTGATGAACTACCTTCGTGCTGTGTGTCGGTCACATCAAACCCTAGAACTTGTTTTCAAAGACAATGCACTTTCTTTGAAGGATTACCCTAAGCATGATGATAGGTTGCAATCAAATTCTCCATTTTCTGTTCAAATTTCATGGATTATGGACTTGTTAGAACGCAATTTGGATGCAAAGTCTAAACTTTACAAAGACCCTGCTTTATGCTCTGTTTTTATGATGAATAATGGGAGATACATTGTTCAGAAGACTAAAGACAGTGAATTGGGAACCCTTTTGGGTGATGATTGGATAAGAAAACACAGTACAAAAGTGCGGCAATGTCATATGAACTATCAAAGAAGCTCGTGGAACAAGTTGCTAGGATTTCTGAAGGTGGAAACACTGGCTGCAAAGCCAATGAAGGAGAAACTAAAGATGTTCAATCTTCATTTTGAAGAGATATGCCGGGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTCAGGGAAGAATTAAGGATCTCAGTTGAAAAGCTCTTGTTGCCTGCATATGGAAGCTTTATTGGAAGGTTTCAAATTATTCCGGAGCTTGCTAAGAATGGTGATAAGTATATCAAGTTTGGAATGGAGGACATTGAAGCTCGGCTTAACAATTTGTTTCAGGGAAGAATTGGATCAAATGGTGGCCGAAAGTGA 1899 0.456 MSENGEEKLLAVARHIAKTLGHNNNNMADDILQIFSNFDGRFSKEKLSDEGAGNDSIRYAALEQTINSLDRQISNHLSSEDFICYNSAAFLAAVDELVSVIEDWSPLSDDKTVNACLVRADDILQQAMFRAEEEFRSLMELGGESFDLTRSKEKSTQNGNSLYDSNDEEEDEGEVDGEEDLIPVAKAVVDYNVVIDALPPATVNGLREIAKRMLAAGFGKECSHVYGGCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWIKASNVALKILFPSERRLGDRVFSGLSSSSAVADLSFMEVCRGSAIQLLNFADAVAIGSRTPERLFRVLDVFETLRDLIPEFEALFSDQYCSFLVNEAITIWKRLGEAISGIFIELENLISRDPVKAVVPGGGLHPITRYVMNYLRAVCRSHQTLELVFKDNALSLKDYPKHDDRLQSNSPFSVQISWIMDLLERNLDAKSKLYKDPALCSVFMMNNGRYIVQKTKDSELGTLLGDDWIRKHSTKVRQCHMNYQRSSWNKLLGFLKVETLAAKPMKEKLKMFNLHFEEICRVQSQWFVFDEQLREELRISVEKLLLPAYGSFIGRFQIIPELAKNGDKYIKFGMEDIEARLNNLFQGRIGSNGGRK* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3583 632 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 622 - -
Psa5g3583 632 SUPERFAMILY Cullin repeat-like 85 621 IPR016159 -
Psa5g3583 632 MobiDBLite consensus disorder prediction 149 177 - -
Psa5g3583 632 Pfam Exo70 exocyst complex subunit 264 618 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa5g3583 632 Gene3D Exocyst complex component Exo70 73 628 - -
Psa5g3583 632 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 622 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3583 Psa-Chr5 280078171 280081349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3583 1 632 EXO70 exocyst subunit family AT5G58430 66.615 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3583 K07195 - gmx:100803694 871.307