Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3566 ATGATGAAAATGACTCATTCACCAATCTTCTTCACACTTCTCATCTTACTCTTCCATCTTCCACATTCATCATCCTTTTCCCTCTCAGTGGAGAATCATGAAGAAAACGCTATAGTCTCTCCCAAAGGCACATTCACCGCAGGTTTTTATCCTATAGGTGAAAACGCTTATTCCTTTGCCATATGGTTCACTCAAAACCATAAAAAGCTTAACAACAATGCCACCATTGTTTGGATGGCAAACCGTGACCAACCAGTTAACGGTAAACGTTCAACACTCTCCCTTCTCAAAACAGGCAACCTCGTACTAACCGATGCAGGACAGTTCAATGTTTGGTCCACAAACACTAACTCGTCCAAACAACTTAAGTTGTTTTTGTACGATACGGGAAATCTCATTCTCAGAGAACATAACATCAATGGTTTCATTTTGTGGCAAAGCTTTGATTTTCCAACTGATACCCTCCTTCCAGATCAAAGTTTCACAGGGTACATGAACCTTGTTTCTTCCAAAAGCAGCACCAACTATTCCTCTGGCTCATACAAGCTTTTGTTCGACAACGATAATCTTCTCCGTCTTCTCTATGATGGCCCTCGAGGCTCAAGCGCGTATTGGCCAGATCCCTTGCTTCTAACTTGGCAAGATGCTAGATCCACGTACAACAGTAGTAGGGTAGCAACATTAAATCGTTGGGGAAACTTCAGTTCTTCAGATGATTTCAATTTCAAAACAAGTGATTATGGAACAATGCTGCAACGAAGGGTGATCCTTGATTTTGATGGAAATGTTCGTGTTTATAGCAGAAAACATGGGCAAGAGAAGTGGTCGGTATCAGCGCAATTCCACCAACAACCTTGTCAAATACACGGGATTTGTGGACCTAATAGCACTTGCAGTTATGATCCAAGAACTGGTAGAAAATGTTCGTGTCTTCCGGGTTATAACATGGTCAATAACCAAGACTGGTCTCAAGGGTGCAAACCCAGCTTCCAATTTTCATGCAACAACGAGACAAAATATGGTTTCAAATTCTTACCTCATGTTGAATTTTACAACTACGACTATGGATTCCATAAAAATTTCACCTATAAACAATGTAAGTATTTGTGCTTACGATTGTGCGAATGCATAGCCTTCCAATTTCGTTACGTGAAGAACAAGGGTTTATATAATTGCTACCCAAAGATGCAGTTACTAAACGGTCGTCGGTCCACAAGGTTTAAAGGTTCACTTTATTTGCGATTGCCAAAACAGAATATTGTTTTTCCGAGTGAATATGATGATAACTTGATTTGTTCGAGAAATAATGAAGTTAAACACATGGGAAGATCATACATCAATGAAAAGGAAAATGGATCACTGAAGTTCATGCTTTGGTTTGCAAGTGGGTTGGGTGGAATTGAGGTGTTATGCATCTTTCTTGTAGGGTGTATCTTATTTAAGAATAGCAAGAAATCTAGTGCCGGAAATCATGGGTATGTTCTAGCTGCAGCAACAGGGTTTAGGAAATTCAGTTATTCAGAACTGAAACAAGCTACAAAAGGTTTTACTCAAGAGATTGGAAAGGGTGCTGGAGGAATTGTTTATAAGGGTGTTTTATCTGATAATCGAGTTGCTGCGATAAAGCGTTTGCATGAAGCAAATCAAGAAGAGAGTGAGAGTGAGTTTCTTGCTGAAGTTAACATCATTGGAAGGCTTAACCACATGAATTTGATTGGAATGTGGGGTTATTGTGCAGAGGGAAAACATAGGTTGCTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCTGATAATCTCTTATCAAATGAACTTGATTGGAGTAAAAGGTATAACATAGTTATGGGAACTGCAAAGGGTCTTGCTTATTTACATGAAGAGTGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATTCTTGTTGACTCTGATTACCAACCTAAGGTAGCCGATTTTGGTTTGTCTAAGATATTGAATAGGGATGGGCGTGATAATTCAAAATTTTCAAGGATAAGAGGTACAAGAGGTTACATGGCACCAGAATGGGTTTTCAACTTGCAGATCACTTCTAAGGTTGATGTTTATAGCTATGGAGTTGTGGTGTTGGAGATGATTACTGGAAAGAGTCCAACAACAAAAATACAAATCAAAGAAGAGTTGTGTCATGAGAGATTGATAACATGGGTTAGGGAAAAAAGGAGAAAAGGATTAGAAGTTGGTTGTTGGGTAGAACAAATTGTTGATCCTAAATTGGGTTCAAGTTACGATGTTGAGAAAATGGAGACTTTGGCAAATATGGCTTTGGATTGTGTAGCAGATGAGAAAAATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGACTATTAAGTAATGAGCATAGTTATTGA 2397 0.3888 MMKMTHSPIFFTLLILLFHLPHSSSFSLSVENHEENAIVSPKGTFTAGFYPIGENAYSFAIWFTQNHKKLNNNATIVWMANRDQPVNGKRSTLSLLKTGNLVLTDAGQFNVWSTNTNSSKQLKLFLYDTGNLILREHNINGFILWQSFDFPTDTLLPDQSFTGYMNLVSSKSSTNYSSGSYKLLFDNDNLLRLLYDGPRGSSAYWPDPLLLTWQDARSTYNSSRVATLNRWGNFSSSDDFNFKTSDYGTMLQRRVILDFDGNVRVYSRKHGQEKWSVSAQFHQQPCQIHGICGPNSTCSYDPRTGRKCSCLPGYNMVNNQDWSQGCKPSFQFSCNNETKYGFKFLPHVEFYNYDYGFHKNFTYKQCKYLCLRLCECIAFQFRYVKNKGLYNCYPKMQLLNGRRSTRFKGSLYLRLPKQNIVFPSEYDDNLICSRNNEVKHMGRSYINEKENGSLKFMLWFASGLGGIEVLCIFLVGCILFKNSKKSSAGNHGYVLAAATGFRKFSYSELKQATKGFTQEIGKGAGGIVYKGVLSDNRVAAIKRLHEANQEESESEFLAEVNIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMEKGTLADNLLSNELDWSKRYNIVMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKILNRDGRDNSKFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGVVVLEMITGKSPTTKIQIKEELCHERLITWVREKRRKGLEVGCWVEQIVDPKLGSSYDVEKMETLANMALDCVADEKNVRPTMSQVVERLLSNEHSY* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3566 798 Pfam S-locus glycoprotein domain 246 315 IPR000858 GO:0048544
Psa5g3566 798 ProSiteProfiles EGF-like domain profile. 282 320 IPR000742 -
Psa5g3566 798 SMART blect_4 29 151 IPR001480 -
Psa5g3566 798 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Psa5g3566 798 CDD B_lectin 35 151 IPR001480 -
Psa5g3566 798 SMART serkin_6 514 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3566 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Psa5g3566 798 Pfam D-mannose binding lectin 75 162 IPR001480 -
Psa5g3566 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 797 - -
Psa5g3566 798 ProSiteProfiles Protein kinase domain profile. 514 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3566 798 PIRSF SRK 1 797 IPR024171 GO:0004674
Psa5g3566 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 206 IPR036426 -
Psa5g3566 798 Gene3D Phosphorylase Kinase; domain 1 491 590 - -
Psa5g3566 798 CDD PAN_AP_plant 333 416 - -
Psa5g3566 798 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Psa5g3566 798 Gene3D Transferase(Phosphotransferase) domain 1 591 797 - -
Psa5g3566 798 SUPERFAMILY Protein kinase-like (PK-like) 494 791 IPR011009 -
Psa5g3566 798 CDD STKc_IRAK 520 791 - -
Psa5g3566 798 Gene3D - 24 149 IPR036426 -
Psa5g3566 798 Pfam Protein kinase domain 517 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3566 798 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 6 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3566 Psa-Chr5 278719447 278722144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3566 504 797 Trihelix Transcription Factor Family AT5G38560 41.137 1.87e-64 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g3566 Pkinase 7.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3566 - - gmx:100806357 1058.13