Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3565 ATGCACCGATCTTCTTCCCTCAAGCTACCAACAATGTCTTCTTTACCATCACAAATCTTCATCATACTCCTCATCATCCTCTTCCATTTCCACCACTCCTCTTCATTCTCCCTCTCAGTAGAAAACCCTGAACAAAACTTCATACTCTCACCGAACAACACTTTCACTGCAGGCTTCTACCCCGTAGGTGAAAATGCATATTCCTTCGCAATATGGTTCACCCAAACACAGAAACACCTTAATAGCAATAACAACAGCGCCACAGTTGTTTGGATGGCAAATCGCAACCAACCCGTCAATGGAAAACGCTCAACACTTTCTATTCTCAAAACCGGCAACCTCGTCTTAACCGATGCAGCTCAATCCAATGTTTGGTCTACAGATACCGCCTCATCAAAACCACTCCAATTACTCTTACATGACACCGGTAACCTCGTTCTTCAAGAACTAAACACAGACACAAACTGTTCCAGCAATAATATTTTATGGCAAAGCTTCGATTCTCCAACGGATACACTTCTACCAGACCAAACTCTAACGAGATTCACCTGCCTCGTTTCATCAAGAAGCGAAAATAATCACTCATCTGGTTTCTACAAACTCTTCTTCGACAATGACAACATTCTTCGCCTTCTTTATGAAGGTCCAAGAGTTTCAAGCGTCTTTTGGCCAGATCCTTGGGCTACAAGCAACGGTGCTGCTGGTAGTGGTAGCAGATCAACTTACAACAGTAGCAGAATCGCTTCTTTGGATTCATTTGGTAACTTTAGTTCTTCTGATAATTTCATTTTCATTACTTCTGATTATGGAACATTGTTGCAACGTAGACTTACACTTGACCATGATGGTAACGTTCGCATTTATAGCAGAAAAGATGAGAAACAAAGTTGGTTTGTTTCCGGCCAATTTAAGCAACGGCCATGTTTCATTCATGGGATTTGTGGACCGAATAGTACTTGTAGTAATGATCCAATGAATGGTAGAAAGTGTTCTTGTTTACCTGCTTATGTTTGGATTGATGATCAAGATAGCTCTCAAGGTTGCAGACCCAATTTTACACTTTCATGCAGTAATAAGACTCATCATGAGTTAAGGTTTTTGCCTTTACCTCATGTAGATTTTTATGGATATGATTATGGCTTTTATGAGAATAAAACTTACAAAGAATGCGAGGATCTGTGTTCACACTTGCGTAGTTGTGCTGGATTTCAGTATACTTTTCTCTTTACAGCTGAAAAGGGTGGTTATTATTTGTGTTTTCCCAAGATTCAGTTACTTAACGGCCATCGTTCACAGAATTTTGAAGCCTTATTCTACTTGAAATTGCCAAAAAGTAGTCATTTTGTCCATGGGATTAAGTATCAACAAAATAGGATGGGAATGAATTGTTCAAGGATCAGAGTGGTAAAGCTTGAGAGAGGATACATAAAAGAGAAAGAAAATGGTTCTTTGAAGTTCATGCTTTGGTTTGCTAGTGGTTTAGGAGGAGTTGAACTCTTGGGATTTTTTCTGGTGTGCTTTTTCTTGTTTAGGGGTAGCAAAGATTGTGGCGAACATAATAACGTGTATGTTTTAGCAGCTGGAGGGTTTAGGAAATTCAGTTACTCTGAATTGAAACAAGCTACAGAAGATTTTAGTCAAGAGATTGGTAGAGGTGCTGGCGGATCTGTGTATAAGGGTGTTTTATCCGATAATCGAGTCGCTGCAATAAAGCGTCTGCATGAAGCAAATCAAGGAGAGAGTGAGAGGGAGTTTCTTGCTGAAGTTAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCTGATAATCTCTCATCAAATAAACTTGATTGGGGTAAAAGGTATAACATAGCTATAGGAACTGCAAAGGGTCTTGCTTATTTACATGAAAAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAAAACATACTTATTGACTCTGATTACCAACCCAAAGTAGCAGATTTTGGGTTGTCTAAGCTATTGAATAGGGGTGACCTTGATGATTCAAAATTCTCAAGGATAAGAGGGACAAGAGGTTACATGGCGCCTGAATGGGTTTTCAACTTGCAAATCACTTCTAAGGTTGATGTTTATAGCTATGGAGTTGTGGTGTTGGAGATGATTACCGGAAAGAGTCCAATAACAGGTATACAAATCAAAGAAGAGCTGTGTCATGAGAGGTTGGTAACATGGGTTAGGGAAAAAAAGAGAAAAGGATCAGAAGTTGGTTGTTGGGTAGAACAAATTGTTGACCCTACAATGGAATCAAGTTATGATGTTGAGAAAATGGAGACTTTGGCAAATGTTGCTTTGGATTGCGTAGGAGAAGATAAAGATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGACTTCTAAGTCATGACTCATGA 2478 0.3943 MHRSSSLKLPTMSSLPSQIFIILLIILFHFHHSSSFSLSVENPEQNFILSPNNTFTAGFYPVGENAYSFAIWFTQTQKHLNSNNNSATVVWMANRNQPVNGKRSTLSILKTGNLVLTDAAQSNVWSTDTASSKPLQLLLHDTGNLVLQELNTDTNCSSNNILWQSFDSPTDTLLPDQTLTRFTCLVSSRSENNHSSGFYKLFFDNDNILRLLYEGPRVSSVFWPDPWATSNGAAGSGSRSTYNSSRIASLDSFGNFSSSDNFIFITSDYGTLLQRRLTLDHDGNVRIYSRKDEKQSWFVSGQFKQRPCFIHGICGPNSTCSNDPMNGRKCSCLPAYVWIDDQDSSQGCRPNFTLSCSNKTHHELRFLPLPHVDFYGYDYGFYENKTYKECEDLCSHLRSCAGFQYTFLFTAEKGGYYLCFPKIQLLNGHRSQNFEALFYLKLPKSSHFVHGIKYQQNRMGMNCSRIRVVKLERGYIKEKENGSLKFMLWFASGLGGVELLGFFLVCFFLFRGSKDCGEHNNVYVLAAGGFRKFSYSELKQATEDFSQEIGRGAGGSVYKGVLSDNRVAAIKRLHEANQGESEREFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEKGTLADNLSSNKLDWGKRYNIAIGTAKGLAYLHEKCLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLNRGDLDDSKFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGVVVLEMITGKSPITGIQIKEELCHERLVTWVREKKRKGSEVGCWVEQIVDPTMESSYDVEKMETLANVALDCVGEDKDVRPTMSQVVERLLSHDS* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3565 825 ProSiteProfiles Bulb-type lectin domain profile. 40 160 IPR001480 -
Psa5g3565 825 PIRSF SRK 8 825 IPR024171 GO:0004674
Psa5g3565 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 16 824 - -
Psa5g3565 825 Pfam Protein kinase domain 546 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3565 825 SUPERFAMILY Protein kinase-like (PK-like) 526 820 IPR011009 -
Psa5g3565 825 Gene3D Transferase(Phosphotransferase) domain 1 620 825 - -
Psa5g3565 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Psa5g3565 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 217 IPR036426 -
Psa5g3565 825 SMART blect_4 39 169 IPR001480 -
Psa5g3565 825 CDD B_lectin 46 169 IPR001480 -
Psa5g3565 825 Pfam D-mannose binding lectin 88 180 IPR001480 -
Psa5g3565 825 SMART serkin_6 543 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3565 825 Pfam S-locus glycoprotein domain 270 336 IPR000858 GO:0048544
Psa5g3565 825 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 16 824 - -
Psa5g3565 825 ProSitePatterns Protein kinases ATP-binding region signature. 549 571 IPR017441 GO:0005524
Psa5g3565 825 Gene3D - 169 299 IPR036426 -
Psa5g3565 825 Gene3D Phosphorylase Kinase; domain 1 513 619 - -
Psa5g3565 825 CDD STKc_IRAK 549 820 - -
Psa5g3565 825 Gene3D - 41 168 IPR036426 -
Psa5g3565 825 ProSiteProfiles Protein kinase domain profile. 543 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3565 Psa-Chr5 278709968 278713398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3565 533 820 Trihelix Transcription Factor Family AT5G38560 42.321 1.01e-63 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa5g3565 Pkinase 2.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3565 - - gmx:100806357 1020.38