Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3549 ATGCAATTAGGAGTGAAGCAGCTTGTTTTGCCTGCTGTTCCCAGTGTGGTTGATACGTGGACCGGTCCTTTTGGCTTTTCAAAGATGACAGAACTTGAGAGGTCAAAGTTTCTGGACTATACTTTCCTAGATTTTCCAGGTACCATCATGTGCCAGAAGTTCTTGACAAAGACGCCGTCTCCAGATTCTGTTTTGACATTAGAGTTCCAACAAAAACTCGGTGCTATGTCCGAAAGCAGTAGTGCTAATAAGTCTCCAGTATCTGAAGTTTGCCAAGCAGGACAGATAGTTATAAAAGATAAGTCGGATACACCAATGTTGGATGCTTTTGAAGGTGAAAGCGATAATGATAATGTATCTAACAAACCTGTTATTGACTGTGTCACCATGGCGGATCAACCAGTTCTTGAGGATGAACAACATTGCCAGAATGGAACCTCCACTGTACAAGGCTCTTCTGAAAAATGGAAGAATGTCTTGCATTATTATAGACGGAGGAAAGTGAAAGGGTAG 513 0.4191 MQLGVKQLVLPAVPSVVDTWTGPFGFSKMTELERSKFLDYTFLDFPGTIMCQKFLTKTPSPDSVLTLEFQQKLGAMSESSSANKSPVSEVCQAGQIVIKDKSDTPMLDAFEGESDNDNVSNKPVIDCVTMADQPVLEDEQHCQNGTSTVQGSSEKWKNVLHYYRRRKVKG* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3549 170 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 72 - -
Psa5g3549 170 PANTHER PHD ZINC FINGER PROTEIN 2 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3549 Psa-Chr5 277795953 277797077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3549 2 57 PHD Transcription Factor Family AT5G63900 57.143 1.24e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3549 - - cam:101498411 199.134