Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3542 ATGTTCCGTGTCAAAGCCATAGTAACGTATAAGAGGGAACCAATAACGCTCTCTCTCTGTCATCCATCCACACATGATCACCATTCTCTCCCAAATGGGTTTCTGTTTTTCCCTCTCTTCCTTCCCTCAAAGTCTCTCAACCACTCTCTTCTTGTTCCATCCATGGACTCAGACAAAGACAATCCTATGCCTGATGGAACAGAATCACAGTTTGGAGGATCTTTCGTTTGCCATGCTGTTAACCGAATCAACTCTAGAGGATATTGGTTTGGAGAAAATCCCCTTGCTTTTGCTGTCCCTCTTTTCTTGATCCAGGTTTTTATCATATTCATCTTCACAAGATTCAGTTACCTTATTCTCAAGCCCTTTGGTCAACCTTCTTTTGTTTCTCAGATTCTTGGTGGTGTAACTCTAGGCCCTTCAATTCTTGGTCACTACTCAGCATTTACAAACAATTTTTTCCCGGTAAGAGGAAGAAACGTGCTTGACACGTTAGCTTTTTTCGGTTTCATGATTTTCATCTTCTTGCTTGGTGTAAAGATAGATCCAACCATCATCTTTCGATCCGGTAAAAGGACATTCGCTATCGGGATTTTATGCTTCTTCGTTCCGTATACTCTCAGCGGTTTATTAGCTGTATTCATCAACCATTTTGCATCACTGGATCATGATATCTCGAAAGGCCTTTCAACTGTGGTGGAAATTCAATGTATCACAGCCTTTCCGGTCATTTCGTGCTTTCTGACTGAACTTCATATCCTCAATTCAGAAATCGGACGCTTGGCCGCGTCGTCTTCGCTAGTATGCGATGTTTGTTTCAGTTTAGTTATGATGTTGAAGTTCGCAGCAAAACTAACTTCCGCAAAATCTATAGGAGTTACCATTGGATCGTTCTTTTCGTCCGTTCTTCTTGTTTTTTTCATAGTTTTTGTTGTTCATCCAGCTGCATTGTATGCTATTAATCACACACCAGAAGGGAAACCTGTTCAAGAAATTTATATAACTGGAACTCTGATAACACTAATATTCTGCGGATTCATCGGTGAAGTTATCGGCTTAGATGCAATTGTTGTATCTTTTATGGTAGGTTTGGCTATACCTGATGGCCCTCCATTAGGTGCAGCATTGGTGGATAAGCTCGAGTGTTTTGTTTCGGTCGTGCTTTTACCGTTGCTTTTCGCTATTGTTGGAATGAGGACAGATGTTTTTGCTATACAGAAGATGAAGAATTTGGGGATAGTTGAGTTGATTATTTGCGTTGCGTTTTTCGGTAAAATATTAGGGGCTTTATTGCCTCTACTTTTCTATAGGATGCCTTTTAGAGATGCAATTTCTCTTAGTCTTATAATGAATTGCAAAGGAACTGTTGAATTGGCATTGTTGATGAACATGAAGTTAAAAAATTTACTAGACGATGAACTGTTTGCGATTCTGGTTCTTAGTTTGGTGCTTGTAACCGGCATTGTATCGCCGGTTGTGAAAGCTCTATATGATCCTTCAAGAAGGTTTCTTGCTTACAAAAGGAGAACAATCTTGCATCACCCAAGCGAAGAAGAATTTAGAATACTAGCTTGCATTCATAAAGAAGATAATGTGTTGGCTGTTTTGAACCTACTTGCTGCTTCAAATCCAACCGAAAGAAACCACATCGATTTAGTTGTACTACAGCTTGTTAAGCTTGTTGGAAGAGCTGCATCCGTGCTTGTTTCGCATAAGCCGCGCGATAAGCCTGGCGAAAAGATCTTCGTTCCATTCACCAAATTTGAAGATGCTTATAAGGGAAAAGTAACACTTCATTGCTATAAAGGTATCTCACCATATGCAACAATGCACAATGATGTGTGCTACTTAGCACTTGAGAAAAGAATAACTTTCATAATCATACCTTTTCATAAGCAATGGATAATCGGAGGGATGGCCGAGTCTTCCTTCGCATTCAAGCAACTCAACAAGAATGTTCTCGAGAAAGCTCCTTGCTCGGTCGGTGTCCTAATTGACCGCGGCAACCAGAAGAAGTTCTGGTGCGGCTACATGAACGAATCAACATATCTAGTTGCTGTGCTTTTCTTTGGAGGCGCAGACGATAGAGAAGCCCTCGCGTATGCGAAACGAATGTTGGATCAACCTAATGTAAATATTACTCTTTTTCATTTTTCATCATCCAAAAACGATGTTGTTGGAGGTACAGATAGAAGCAAAAAGCTTGATACTCAAATATTGAGTGAGTTTAGGCTAAGTGGTTTTAGGAATGATAGAGTTTCGTATAAAGAAGAAGTTGTTACGAATGGAAGAGACGTGCTTTCGGTTATCGAATACATGGAGAGTTATTATGATCTTGTTATGGTTGGAAGGAGACATGAAGATTCACAGTTAATGTCTGAACTTAAGAAATGGAAGCATGGTGAGTTGGGAACTGTAGGAGAGATTCTTGCTTCTCTGAACATTGGTGCTAAAACATCAATTTTGGTTGTGCAACAACAAACTAAATTTTGGGGGTCACGTGATCCAGAGGAATCTACACATTTGAGAAGAGTAAATATATAG 2544 0.399 MFRVKAIVTYKREPITLSLCHPSTHDHHSLPNGFLFFPLFLPSKSLNHSLLVPSMDSDKDNPMPDGTESQFGGSFVCHAVNRINSRGYWFGENPLAFAVPLFLIQVFIIFIFTRFSYLILKPFGQPSFVSQILGGVTLGPSILGHYSAFTNNFFPVRGRNVLDTLAFFGFMIFIFLLGVKIDPTIIFRSGKRTFAIGILCFFVPYTLSGLLAVFINHFASLDHDISKGLSTVVEIQCITAFPVISCFLTELHILNSEIGRLAASSSLVCDVCFSLVMMLKFAAKLTSAKSIGVTIGSFFSSVLLVFFIVFVVHPAALYAINHTPEGKPVQEIYITGTLITLIFCGFIGEVIGLDAIVVSFMVGLAIPDGPPLGAALVDKLECFVSVVLLPLLFAIVGMRTDVFAIQKMKNLGIVELIICVAFFGKILGALLPLLFYRMPFRDAISLSLIMNCKGTVELALLMNMKLKNLLDDELFAILVLSLVLVTGIVSPVVKALYDPSRRFLAYKRRTILHHPSEEEFRILACIHKEDNVLAVLNLLAASNPTERNHIDLVVLQLVKLVGRAASVLVSHKPRDKPGEKIFVPFTKFEDAYKGKVTLHCYKGISPYATMHNDVCYLALEKRITFIIIPFHKQWIIGGMAESSFAFKQLNKNVLEKAPCSVGVLIDRGNQKKFWCGYMNESTYLVAVLFFGGADDREALAYAKRMLDQPNVNITLFHFSSSKNDVVGGTDRSKKLDTQILSEFRLSGFRNDRVSYKEEVVTNGRDVLSVIEYMESYYDLVMVGRRHEDSQLMSELKKWKHGELGTVGEILASLNIGAKTSILVVQQQTKFWGSRDPEESTHLRRVNI* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3542 847 Gene3D - 101 503 IPR038770 -
Psa5g3542 847 PANTHER OS08G0117800 PROTEIN 69 832 - -
Psa5g3542 847 Pfam Sodium/hydrogen exchanger family 107 493 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa5g3542 847 PANTHER CATION/H + ANTIPORTER 69 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3542 Psa-Chr5 277099547 277102948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3542 63 847 Antiporter Super Family AT2G13620 37.561 1.76e-175 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3542 - - gmx:102665255 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3542 5 277099547 277102948 Psa5g3542 5 277099547 277102948 ECH