Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3530 ATGCCTTCTTCTACTCTTCGATGGCTTAGCCTAGTTGCCATCATTTGGCTCCAAGTCATAAATGGAACAAACACTAATTTCCCAGCTTATTCTTCTCAGCTAAAACAACTTCTCTCAATTTCACAAGTTGAACTCAATAACCTTGCTTTTGCATCTGATGCTGGTAAACTTTTTGGTTGGTTTTCCGGCCTCGCTGCTATTTACCTCCCCCTCTGGCTCGTCCTCATCATCGGTTCGTTTCTCGGACTAATCGGTTATGGTGTACAATATCTCTTCATAACCAACCAAATTTCTTATCTATCATACTGGCATGTGTTCTTCCTAACATTTCTCGCTGGCAATAGCATTTGTTGGATCAACACTGTCTGTTATGTTGTCGCCATACGGAACTTTCTATCTAATCGCCAAGTCGCTGTCGGATTAACAACTAGTTATCAAGGATTAAGTGCAAAGATTTATACAAATATAGTTGATGTTGTTTCTTCACACAATAAAGCTAAAACTTTTCTTTTATTGAACTCTATAGTACCTGTGGTTGTTTGCTTCATATTAGCTCCTATACTTGCAAATTTTCACAAAAAAAATTTCCTCACTTGGTGTCCTTATTGGTATTCTAGTATCTCTTCTCTTACCTCTTTACTTCCAATTCTTGTAAAGATCAAGGAGCTAGTTGAATCATTGCACAAAAAAAGAGAAAGTCTAAGAATCTACCATTTTTACCATGGAGGAGAATTCGATAAAGAGAGTTATGTGAAAGAGAGTGAAGATAGTTGTGAAGTTGAAGATGGTTGTGTTATGGAAGAAATAGGTTGTTCTGCTACTTCCTATTTGGTGTCTTTGTCTTCTTCTTTTGGATTCTTTGGTCGTCTCATTCCATCTCTTCTAGATTACTTCTACAGGGGAAAACGTACAATTTCAAGACCTGCCTTAATGGTGGGAGTAATGGCACCAACAGCAGGTGCATTCTTGTTACTTCTCAACAAAACAGACATTGCTCTTTACATAAGCACAGCAGTGATTGGAGTCTCAACTGGAGCAATCACTTCCACTGCTATTTCCACAACAACTGAACTTTTTGGAACTAACAATTTCTCTGTAAATCATAATGTGGTTGTGGCTAATATTCCAATTGGATCTTTTCTATTTGGTTACTCAGCAGCACTTATCTACCGTAACCAAGGAAATGGAGATGGAAAATGCATGGGCGTGGAATGTTTTAGCAACACTTTTATCATTTGGGGTTCCTTTTGTTGCTTTGGAACTTTTTTGGCTTTGATTCTATATTTTAGGACTCGCAAGTTTTACTCACAAAGTCAATAG 1320 0.3773 MPSSTLRWLSLVAIIWLQVINGTNTNFPAYSSQLKQLLSISQVELNNLAFASDAGKLFGWFSGLAAIYLPLWLVLIIGSFLGLIGYGVQYLFITNQISYLSYWHVFFLTFLAGNSICWINTVCYVVAIRNFLSNRQVAVGLTTSYQGLSAKIYTNIVDVVSSHNKAKTFLLLNSIVPVVVCFILAPILANFHKKNFLTWCPYWYSSISSLTSLLPILVKIKELVESLHKKRESLRIYHFYHGGEFDKESYVKESEDSCEVEDGCVMEEIGCSATSYLVSLSSSFGFFGRLIPSLLDYFYRGKRTISRPALMVGVMAPTAGAFLLLLNKTDIALYISTAVIGVSTGAITSTAISTTTELFGTNNFSVNHNVVVANIPIGSFLFGYSAALIYRNQGNGDGKCMGVECFSNTFIIWGSFCCFGTFLALILYFRTRKFYSQSQ* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3530 439 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 194 - -
Psa5g3530 439 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 265 438 - -
Psa5g3530 439 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 194 - -
Psa5g3530 439 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 265 438 - -
Psa5g3530 439 SUPERFAMILY MFS general substrate transporter 273 433 IPR036259 -
Psa5g3530 439 SUPERFAMILY MFS general substrate transporter 21 190 IPR036259 -
Psa5g3530 439 Pfam Nodulin-like 7 191 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3530 Psa-Chr5 275764676 275766922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3530 7 437 Nodulin-like Gene Family AT3G01630 30.057 2.99e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3530 - - gmx:100793370 550.436