Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3523 GTAAGCTAGTGGAATCTGCTGATGATGGAAAGCGTAGAGTCCATTGTAATCCTAATGCAGAAAACTACGGTAATAAAATTCTTTGTTGGTGTTCACAATTGGAATGGGAGTGTTGCATGCAGTCTGTGATGGGATTTGGTGCATCTCAATTCTTGAAATCAATTGTTGAACTTTCAAGGGGAAGAACTGAGCCCTCGGTGATACCTGTGTGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCAGAAAGTCCGATGAACAATGTTGCATTTTCACCTTTTCTAAATGAAACTAGTAGTACAGTTATAAAGAAATATTGTTTTAAAGTGGAGGGTGAAATGATAAGAAGGTTAAAGATGAGTTTGAGGAAGGAAAATGAAAATTTAGGGTTCACAACTTTCGAAGCACTAGTTGGTTTTGTGTGGAGGTCAAGAGCAAGAGCTTTAAAACTTAACAACAATGGAGAAACAATGTTATCTGTGCTAGTTGGTATGAGGCGGAACTTGAAGGATTTTGAACCTTTACCTAAAGGGTATTATGGTAAATCTTGTGTGGATGCAAACCTTGTGTTGAAAGTAAGTGAGCTCAATGAAAGGCCACTCTATGAAATTGTTAAGCTCATCAAAGAGACTAAAAACGTTGGTTGTACTAGTGAATATGTCAAAAACTCAATCGACACTTGGGAGACGAATGGTAAGGAGAGTTTGAAAATGAAAAGTGGTGGTGCAGTAACAGTTCTGACAGAGTGGAGGCATTTGTGTTTTCTTAATGAAAATGTAGAATTTGGTGGGAATGAAGTGGTGAATGTAGTACCAGCACCATGCAACTTGTTTGCGAGTGTGGATATGAGCATTTTTACATCTTCTAATAAATTTGATGATGAGAATGATCCATCAATGAAAGGAGGAGTTAATCTTTTCACATCACTCCCTGTTGATGCCATGCCTAGGTTTAAAGAGGAAATTGAATCTTTAAGGTTTCAACTTTAG 1001 0.3756 KLVESADDGKRRVHCNPNAENYGNKILCWCSQLEWECCMQSVMGFGASQFLKSIVELSRGRTEPSVIPVWERERLVGSITKQPFPESPMNNVAFSPFLNETSSTVIKKYCFKVEGEMIRRLKMSLRKENENLGFTTFEALVGFVWRSRARALKLNNNGETMLSVLVGMRRNLKDFEPLPKGYYGKSCVDANLVLKVSELNERPLYEIVKLIKETKNVGCTSEYVKNSIDTWETNGKESLKMKSGGAVTVLTEWRHLCFLNENVEFGGNEVVNVVPAPCNLFASVDMSIFTSSNKFDDENDPSMKGGVNLFTSLPVDAMPRFKEEIESLRFQL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3523 332 Pfam Transferase family 44 327 - -
Psa5g3523 332 Gene3D - 97 325 IPR023213 -
Psa5g3523 332 PANTHER ACYL TRANSFERASE 4 43 329 - -
Psa5g3523 332 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 43 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3523 Psa-Chr5 275377358 275378484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3523 28 266 Monolignol Biosynthesis Gene Families AT5G48930 21.912 1.32e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3523 K20240 - gmx:100801843 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3523 5 275377358 275378484 Psa5g3523 5 275377358 275378484 ECH