Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3522 ATGTATACCGATCATCCAATTCATGATTCTGATTCGAGTTTCGACATTTTTCATGTATTGAAAGAAGCGCTTTCAAAGGCTTTGTGTTATTATTATCCTCTTGCAGGTAAGCTAGTGGAATCTGCTGATGATGGAAAGCGTAGAGTCCATTGTAATCCTAATGCAGAAAACTACGAAATTGCAAAATATTTGGTGTTTGTCCTCAAGATAAAGTTACCCTTTGGTGTCAAGTTTGGTGCATCTCAATTCTTGAAATCAATTGTTGAACTTTCAAGGGGAAGAACTGAGCCCTCGGTGATACCTGTGTGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCAAAAAGTCCGATGAACAATGTTGCATTTTCACCTTTTCTAAATGAAACCAGTAGTACAGTTATAAAGAAATATTGCTTTAAAGTGGAGGGTGAAATGATAAGAAGGTTAAAGATGAGTTTGAGGAAGGAAAATGAAAATTTAGGGTTCACAACTTTCGAAGCACTAGCTGGTTTTGTGTGGAGGTCAAGAGCAAGAGCTTTAAAACTTAACAACAATGGAGAAACAATGTTATCTGTGCTAGTTGGTATGAGGCGGAACTTGAAGGATTTTGAACCTTTACCTAAAGGGTATTATGGTAACTCTTGTGTGGATGCAAACCTTGTGTTGAAAGTGAGTGAGCTCAATGAAAGGCCACTCTATGAAATTGTTAAGCTCATCAAAGAGACTAAAAACGTTGGTTCTACTAGTGAATATGTCAAAAACTCAATCGACACTTGGGAGACGAATGGTAAGGAGAGTTTGAAAATGAAAAGTGGTGGTGCAGTAACAGTTCTGACAGAGTGGAGGCATTTGGGTTTTCTTAATGAAAATGTAGAATTTGGTGGGAATGAAGTGGTGAATGTAGTACCAGCACCATGCAACTTGTTTGCGAGTGTGGATATGAGCATTTTTACATCTTCTAATAAATTTGATGATGAGAATGATCCATCAATGAAAGGAGGAGTTAATCTTTTCACATCACTCCCCGTTGATGCCATGCCTAGGTTTAAAGAGGAAATTGAATCCTTAAG 1085 0.377 MYTDHPIHDSDSSFDIFHVLKEALSKALCYYYPLAGKLVESADDGKRRVHCNPNAENYEIAKYLVFVLKIKLPFGVKFGASQFLKSIVELSRGRTEPSVIPVWERERLVGSITKQPFPKSPMNNVAFSPFLNETSSTVIKKYCFKVEGEMIRRLKMSLRKENENLGFTTFEALAGFVWRSRARALKLNNNGETMLSVLVGMRRNLKDFEPLPKGYYGNSCVDANLVLKVSELNERPLYEIVKLIKETKNVGSTSEYVKNSIDTWETNGKESLKMKSGGAVTVLTEWRHLGFLNENVEFGGNEVVNVVPAPCNLFASVDMSIFTSSNKFDDENDPSMKGGVNLFTSLPVDAMPRFKEEIESL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3522 361 Gene3D - 1 69 IPR023213 -
Psa5g3522 361 Pfam Transferase family 79 360 - -
Psa5g3522 361 Pfam Transferase family 16 52 - -
Psa5g3522 361 Gene3D - 113 358 IPR023213 -
Psa5g3522 361 PANTHER ACYL TRANSFERASE 4 12 55 - -
Psa5g3522 361 PANTHER ACYL TRANSFERASE 4 78 361 - -
Psa5g3522 361 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 78 361 - -
Psa5g3522 361 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 12 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3522 Psa-Chr5 275292880 275294205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3522 18 299 Monolignol Biosynthesis Gene Families AT5G48930 23.235 1.87e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3522 K20240 - gmx:100801843 274.248