Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3505 ATGAACGGTGGTGATCCTTGTGAGGAGTATTGGACAGGAGTAGCTTGTTCTGACTCCTCAGTTATACATCTCAAAATTCAAGGATTGAACCTTACCGGATATCTTGGATCCTCGCTGTATAATCTACAAAATTTGAAGATATTTGATATCAGTTCCAACAGCATAATGGGTGAAATACCATACGATATACCTCCAATGCCCACATATGGTGATGAATTTTCGATGCAAATCCCAAACAATAAGGTCGGCCTTATAATTGGTAAAGGAGGAGAACAATTAAGAATTACTTTTAATGTTAAAACACCAATTGCGAATGGAAGATCGAATTTGGATCCAACTCAATCCGGCTCGAATTCCGGTGCGGTGGATTTTCAGAGATCGCAGAGTCATCACTACGGTGGTTACGTGGCGAAGTGGTCACGCGAGAGGGAAGTGAAGTGA 441 0.415 MNGGDPCEEYWTGVACSDSSVIHLKIQGLNLTGYLGSSLYNLQNLKIFDISSNSIMGEIPYDIPPMPTYGDEFSMQIPNNKVGLIIGKGGEQLRITFNVKTPIANGRSNLDPTQSGSNSGAVDFQRSQSHHYGGYVAKWSREREVK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3505 146 CDD KH-I 72 94 - -
Psa5g3505 146 ProSiteProfiles Type-1 KH domain profile. 70 94 - -
Psa5g3505 146 Gene3D Ribonuclease Inhibitor 1 70 IPR032675 -
Psa5g3505 146 SUPERFAMILY L domain-like 6 66 - -
Psa5g3505 146 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 55 94 IPR009019 GO:0003723
Psa5g3505 146 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 3 81 - -
Psa5g3505 146 Gene3D K Homology domain, type 1 71 95 IPR036612 GO:0003723
Psa5g3505 146 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3505 Psa-Chr5 273555467 273557629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3505 1 69 Strubbelig Receptor Gene Family AT5G06820 49.275 9.09e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3505 - - cam:101498175 120.553