Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3500 ATGAATATCTTGTATCTCTTTAGTATCACCATTGCATGTGGTATTTTTGGAAATATTATTTCAAATGCTAATCCTCTATCATACGAAGCCATATTTAACTTCGGTGACTCTACAAGTGACACCGGAAATGCCGCATTTGACCATCCACCAATGGATAAAAATAGTCCTTATGGTTCAACGTACTTCAAACATCCAGCGGGACGTTTGTCTAATGGGAGACTCATTATAGATTTCATAGCTGAAGCATACGGGTTGCCTTTTTTACCGGCCTATAAAAATATCACCCAAAGCCAAGAAGATATAAAAAGGGGAGTTAACTTTGCATATGCTGGTGCAACTGCACTTGAGTTCAAGTATTTTGATCGTAGTGGAGTTAGACCACCAGCGACAGAAAACTCATTGAATGTGCAGTTTGGTTGGTTTAAAAAGATAAAACCATCCTTATGTAAAAGCAAAGATGAGTGCGACAGCTTCTTCAAACAAACATTGTTTCTAGTGGGAGAGATTGGTGGGAATGATGTTTTTTCTCATATTTCTAAAACTGTTACAGAACTTCGTGAAATAGTTCCTTTAATCGTCGAATCCATTACAAATACAACTTTAGCATTACTCGAAGAAGGAGCAGTAGAGCTAGTGGTTCCAGGAAACTTTCCAATAGGCTGCAATGCTGGATTATTGTCTATGGTGAATAGTAATAAGAAAGAAGACTATGATGAATTTGGATGTTTGATATCTTACAACACTTTTACTGAATACTTTAATGAACAACTAAAAAATTCTATAGAGACATTAAAACAGAAACATCGTCAAGCTAAGATAATATATTTTGACTACTACAACGATGACAAACGTTTATATCAAGCACCACAACAATATGGATTTACTTCTGATAAGTTTGAAGTTTTGAAAGCTTGTTGTGGAGGTGGTGGGCCATACAATATTAATGAAAAGTTTTGTGGAATGCCTGGTACAACTGTTTGCTTTGATCCTTCAAAACAAATAAATTGGGATGGAGCCCACTTTACTGAAGCATCACACAAGCAAATAGCAAAAGGTTTAGTGGAAGGACCTTTTGCAAATCCCTCTCTAAAATCTGCTCCTTTTAAGATAGCATAG 1116 0.3611 MNILYLFSITIACGIFGNIISNANPLSYEAIFNFGDSTSDTGNAAFDHPPMDKNSPYGSTYFKHPAGRLSNGRLIIDFIAEAYGLPFLPAYKNITQSQEDIKRGVNFAYAGATALEFKYFDRSGVRPPATENSLNVQFGWFKKIKPSLCKSKDECDSFFKQTLFLVGEIGGNDVFSHISKTVTELREIVPLIVESITNTTLALLEEGAVELVVPGNFPIGCNAGLLSMVNSNKKEDYDEFGCLISYNTFTEYFNEQLKNSIETLKQKHRQAKIIYFDYYNDDKRLYQAPQQYGFTSDKFEVLKACCGGGGPYNINEKFCGMPGTTVCFDPSKQINWDGAHFTEASHKQIAKGLVEGPFANPSLKSAPFKIA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3500 371 Coils Coil 254 274 - -
Psa5g3500 371 CDD SGNH_plant_lipase_like 30 357 IPR035669 -
Psa5g3500 371 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 2 371 - -
Psa5g3500 371 Gene3D SGNH hydrolase 18 356 IPR036514 -
Psa5g3500 371 Pfam GDSL-like Lipase/Acylhydrolase 31 351 IPR001087 GO:0016788
Psa5g3500 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 371 - -
Psa5g3500 371 SUPERFAMILY SGNH hydrolase 33 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3500 Psa-Chr5 273193628 273195219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3500 9 355 Pollen Coat Proteome AT1G75910 27.446 9.03e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3500 - - gmx:100794616 513.072