Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3498 ATGGTTTTCCAATCACATAATAGCATTTTTTCTATCTTTATTTTGTTTTCCTTCTTGGCAAATGCCTCTGCTCAACTATCTCCAGATTTCTATGCAACAACATGTCCCAAAGCTCTCTCTATCATAAACTCTGCAGTATGTAGCGCTGTTTCCAAAGAGCGTCGCATGGGCGCTTCGTTGCTCCGTCTTCATTTTCACGATTGCTTTGTCAACTTGAGTGGTCCAACATGGAGTGTTGGGTTAGGCAGAAGAGATTCAACAACTGCTAGTAAAGATACAGCCACTAGTGATATTCCATCCCCTCTAATGGATCTCAGTGACCTCATAACTGCTTTTTCAAATAAGGGATTCACCACCAAAGAGATGGTAGTCCTTTCAGGTGCACATACAACAGGTCAAGCCAGGTGTCAGTTATTCAGAGGCCGAATTTACAATGAAACAATCATTGACTCAAGTTTTGCAACCTCAGTGCAATCAAACTGTCCAAGCACAGGTGGTGATAGCAACCTAACCCCACTTGATGTCACAACCAATGTGTTGTTTGACAACGCTTATTTCAAGAATCTAGTTAACAAAAAAGGACTTTTACATTCTGATCAACAACTCTTCAGTGGTGGTTCTACTGACTCTCAAGTCACTGCCTATAGCACAAGCCTTTCATCTTTCTATACAGATTTTGCTAGTGCTATGGTGAAAATGGGAAATCTCAGCCCTTTAACAGGAAACAACGGTCAGATTCGTACGAATTGCCGCCAAGTTAACTAA 765 0.4131 MVFQSHNSIFSIFILFSFLANASAQLSPDFYATTCPKALSIINSAVCSAVSKERRMGASLLRLHFHDCFVNLSGPTWSVGLGRRDSTTASKDTATSDIPSPLMDLSDLITAFSNKGFTTKEMVVLSGAHTTGQARCQLFRGRIYNETIIDSSFATSVQSNCPSTGGDSNLTPLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTAYSTSLSSFYTDFASAMVKMGNLSPLTGNNGQIRTNCRQVN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3498 254 PANTHER PEROXIDASE 70 254 - -
Psa5g3498 254 PANTHER PEROXIDASE 18 70 - -
Psa5g3498 254 CDD secretory_peroxidase 25 253 IPR033905 GO:0004601|GO:0042744
Psa5g3498 254 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 Pfam Peroxidase 72 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 Gene3D Peroxidase, domain 2 99 233 - -
Psa5g3498 254 SUPERFAMILY Heme-dependent peroxidases 25 254 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Psa5g3498 254 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 Gene3D - 73 254 - -
Psa5g3498 254 Gene3D - 25 71 - -
Psa5g3498 254 PANTHER PEROXIDASE 72-RELATED 18 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 PANTHER PEROXIDASE 72-RELATED 70 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3498 254 ProSiteProfiles Plant heme peroxidase family profile. 16 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3498 Psa-Chr5 273042831 273045016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3498 24 71 Peroxidase AT5G05340 64.583 1.87e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3498 K00430 - gmx:100818176 322.398