Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3474 ATGGAAATTGGAAAGGAACTTGCAATCGGACTCCCTGCTCCTCTTCCAGATGTTGAACGTTATTCATCTCGACACTATATTTCTTTTAAAAGTAGAGAATGCAAATATAAAGAGCTTTTGGATGCATTGAAAGATGACAACAATTATATAATCGGGTTGCAAGGGATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAGTTGGTAAGAAACTTAAGCAATCCAAACAATTTACGTCCATTATTGATACAGCAGTTTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCATTGGGATTGAAATTTGATGACTGTAGTGAATCAGACCGACCCAAAAAACTATGGAAAAGATTAACCGATGGTGAAAAGATTCTTCTAATATTGGACGATGTTTGGGGTGATATTGATTTTGAAGAAATAGGGATTCCATACATTGACAATCACAAAGGTTGTAGAATTCTTGTAACCACGCGCAATGTGTTGGTATGCAACAAATTAGGATGCAGTAAGACAATCAGATTGGAGCTCTTGTCTGAAGATGAAGCATGGGAAATGTTCAAATGGTATGCTGGTCTAACTGAAATTTCAACTAAAAGTTTGCTCGACAAGGGACATAAAATTGCGAATGAGTGCAAAAGATTACCAATTGCAATTGCTGTAATCGCTAGTAGTTTGAGGGGCGAACAACGTCAGGATGAGTGGAATGCTGCCTTAAAATCCTTGCAAAAACATATGTCCATGCATGGTGTTGATGATGAACTTGCTAAAATTTATAAATGCTTGAAGTTTAGCTACGATAATATGAAGAATGAAAAGGCAAAGAGTTTATTCCTCTTGTGTTCTGTATTTCGAGAAGATGAAGATATTTTTATTCATACGTTAGTCAGACTTGCCATCGGAGGAGGTATTTTTGGGGAAGACTATGGCAGCTACGAAGATGCTCGAAGTCAAGTAGTTATAGCCAAAAATAAACTCTTCGATTCTTGTTTATTGTTGGGAGCCGATAAATATAGGGTAAAAATGCATGACTTGGTTCGCGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAATAAACTTGTATGATAAAAATCAAAAGGCAATGCTAGAACGGGAGAAGAATTTTAAATATTTGTTATGGGAAGGAAAGGTGAAGGACGTGCTTTCATGCAAGCTTGATAGTTCAAAGCTCGAGATTCTAATTGTCATCATGTATAAGGACAGTGATTGCCACAATGAGAAAATCGAAGTCCCAAATTCATTTTTCGAAAATATCAGTGGCCTTAGAGTTTTTCATTTATTTAGTGATTTTTATCGAGCACCTCTGTCATTACCTCAATCAATTCAGTCGTTGAAGAATATTCGATCTCTTCTTTTTAACCGTCTTGATTTGGGTGATATATCTATTTTGGGTAATCTACAAAGTCTTGAGACACTTGATTTGGATGTGTGTAAAATTATTGAATTGCCGGACGTACTTGCAAAGCTACATAATCTTAGATTGTTGTACTTGAGACGTTGTAAAATTAGAAGGAATAATCCATTTGAAGTGATTGAAGGATGCTCCTCACTTGAAGAGTTGTATTTCATAGACAGTTTTAATGATTGTTGCCGAGAAATAACCTTCCCAATGTTACAAAGATTTATAGTGGATGATAATGGGATTATATCTATGAATGAGTCACTATCAAAATGTGTGTCTCTTTTACATCAAGAACATGAACATTTACTCTCTGAAAAAAAACTCAAGGATTGTATTCAAGCAGCAGAGGTTCTTATACTAAGAAGAATCTGGCGGGGATGGATAAATATCATACCTGAGATTGTTCCTATGGATCATGGTATGAATGATCTAGTCGAGCTCAGATTGAGTTACATTTCACAACTTAAGTGCCTCATCGACACTAAGAATGATAATTCTCAAGAAACAACTGTCTTCAACAAGTTGGTTGTACTAGAATTGGAAAAAATGGAAAGTTTGGAAGAATTGTGCAATGCTCCTCTTTCTTTTGATTCTTTGAAGAATTTAGAGCAGCTGAGCATCCAGGAATGCAAACAATTGCAAAGCTTATTTATGTGCAACCTAAACCTCTGCAATTTAAAGAGATTGTTATTGATAGGATGTCCGACGTTGATCTCCCTATTTCAACTGACTACTTCTCGTAGCCTAACGTCGTTGGAGGAATTGACAATAATTCAATGCAGGAATCTTGAATACATAATAACAGATGAAAGAAAAGAGAAGGAACCGAGAGGAGAAATAGTTGTTGACGATGATAATGATAGCAAGAGGAGTCACGGATCAATGTTTCCAAAACTTAAAGATCTTCGTATTCAACAGTGCCATGGATTAAAATTTATATTTCTGTTTCTCTCAATTCAAGATCTTCCGGCACTAGAATATTTCTCAATATTTCGTTGTGAGAAGCTGCAATACATATTTGGCCAATATGTACAACTTGGTTCTCTAAAACAAATGGATCTTGGGGATTTGCGAAATTTAATAAATATTTTTCCAAAATGTCATCTTACCACATCTTCCGAACCTAAGAAAGACAGGGTCTTTTTATGGACTGATATATGTTGCTTCGGTAAAAAATACAGACACAAGTCGATGAGTTTTACAAGTACTGAAATCCCAGTGGTTTTTGAAGATAAACATCAGGATTGCTTAACAGCATGGGAATCAAAATCATATTCCCTCGGCATATGGGAACGGGTTCAATATTTTTTGACACAATCACTCTTCATGTGGAATATTAAAGATATTGTATTGGTTGATATTCCAAAGATAGAATCATTATTTATCCTATCTATTGCTCCAAGAATATTGTTAGAAACTTTGACAATTAAGAACTGCAGTGAATTGAAGCACATAATAATAGACACCGGAGATCATGAAAATGGTGGCAATAACTTGCACAGTGTCTTCCCAAAATTAAAAAATGTCCAGATTGAAACTTGCATGAAATTAGAATATATATTTGGACACTACTCTGATGCTCGTCAAAACCATAATGAGATTCACCTTCAGCTTCAAGCACTGGAGCGTCTCTATCTTATACATCTGCCAAGTTTAGTTGCCACATGTCCACAGCATTATCGCACAATATTTCCACTTTTGGAAGATCTTTTAGTCGATTACTGCCTGCAGTTCGCTATCAAATCCATTGGTGATCTCACAATCAAGAAGGAATTGAGTGGGAACATGGATCATTTTCTCGCTTTGAAAAGTCTCAAGCTATATTATTGGAAAGTAGAACATATATATTTTCTCAACAAAGAAGTACATGAACAACATATGAACTTAGGTTTGCAATACATTTTGTTGCAAGATCTGCCTACGACGACATGTCTTTTGGTTGGTCCCAAAAATTCATTTTCCCTCCATCACCTTACAGTGATAAAAATCAGGCGATGTGAAAAATTGGAAATTGTGTTTTCCACATCTATATTAAGATGCCTACCACAATTGGTTGCTCTAAGAATAGTAGAATGCGAAGAGTTGAAGCATATTATTGAAGATGATTTGGAGAATGACAAATCCATAAATTTTGAGTCTACAAACACATACTTCCCAAAGCTAGAAATACTTATCGTAGGAAACTGCAACAAACTCAAATGTGTCTTTCCGACTTCCGTATGTAAAGAGCTTCCAAAGCTAAAAGTTCTGATAATAAGAGAAGCATATGAGCTGCAACAAATATTCAAAACCGAAGGTGATGATCAGAAACTCGAGATTCCAAATCTGGAAGTTGTATCATTTATCAATCTGCCAAACCTCTCCGATGCTCAAAAAGTGCACTTTGAGGCCGTAAATTGTCGTCTTGTACAAAACTGTCATAATTTCTCTCTGACTTCAGCATCAAAATCGGATGACATAGATGACATTATTGATCCTTTGTTCGACATAGATTCTGATATCTATATGGAACTCATGGTTCTATTGCAATCGCAACCATTAAAAGAAGCGTACAAAGGCCACCACACCTGGAATCAAAGTCCTACTTCAGAAATCACTAGAGAATTTGCAGATGGGGTTGGGATTGAAGCGAAAGCAGCATTAGGACACATAGGACACATATTGACTTCTCCACAGATGTTATTGAATGAACAATCAATGGATCAACAACTATTGACGAACAAACAACATTCACTTGGAGAAACTGAAACGACCAATAAACCTCAGTTGGATGGTTCTGTCACGCCGCCAGAAAAAACTTTAGCAGCAAATTCTTCTACCATTTCAGAAACAAAGAAGGAGCAACCTATACAATTACTTGGTCCTAAACAAATGGTATTTCCCCTCTTTTGGCTATAA 4341 0.3617 MEIGKELAIGLPAPLPDVERYSSRHYISFKSRECKYKELLDALKDDNNYIIGLQGMGGTGKTTLAKEVGKKLKQSKQFTSIIDTAVSFSPDIKKIQDDIAGPLGLKFDDCSESDRPKKLWKRLTDGEKILLILDDVWGDIDFEEIGIPYIDNHKGCRILVTTRNVLVCNKLGCSKTIRLELLSEDEAWEMFKWYAGLTEISTKSLLDKGHKIANECKRLPIAIAVIASSLRGEQRQDEWNAALKSLQKHMSMHGVDDELAKIYKCLKFSYDNMKNEKAKSLFLLCSVFREDEDIFIHTLVRLAIGGGIFGEDYGSYEDARSQVVIAKNKLFDSCLLLGADKYRVKMHDLVRDAAQWIANKEIQTINLYDKNQKAMLEREKNFKYLLWEGKVKDVLSCKLDSSKLEILIVIMYKDSDCHNEKIEVPNSFFENISGLRVFHLFSDFYRAPLSLPQSIQSLKNIRSLLFNRLDLGDISILGNLQSLETLDLDVCKIIELPDVLAKLHNLRLLYLRRCKIRRNNPFEVIEGCSSLEELYFIDSFNDCCREITFPMLQRFIVDDNGIISMNESLSKCVSLLHQEHEHLLSEKKLKDCIQAAEVLILRRIWRGWINIIPEIVPMDHGMNDLVELRLSYISQLKCLIDTKNDNSQETTVFNKLVVLELEKMESLEELCNAPLSFDSLKNLEQLSIQECKQLQSLFMCNLNLCNLKRLLLIGCPTLISLFQLTTSRSLTSLEELTIIQCRNLEYIITDERKEKEPRGEIVVDDDNDSKRSHGSMFPKLKDLRIQQCHGLKFIFLFLSIQDLPALEYFSIFRCEKLQYIFGQYVQLGSLKQMDLGDLRNLINIFPKCHLTTSSEPKKDRVFLWTDICCFGKKYRHKSMSFTSTEIPVVFEDKHQDCLTAWESKSYSLGIWERVQYFLTQSLFMWNIKDIVLVDIPKIESLFILSIAPRILLETLTIKNCSELKHIIIDTGDHENGGNNLHSVFPKLKNVQIETCMKLEYIFGHYSDARQNHNEIHLQLQALERLYLIHLPSLVATCPQHYRTIFPLLEDLLVDYCLQFAIKSIGDLTIKKELSGNMDHFLALKSLKLYYWKVEHIYFLNKEVHEQHMNLGLQYILLQDLPTTTCLLVGPKNSFSLHHLTVIKIRRCEKLEIVFSTSILRCLPQLVALRIVECEELKHIIEDDLENDKSINFESTNTYFPKLEILIVGNCNKLKCVFPTSVCKELPKLKVLIIREAYELQQIFKTEGDDQKLEIPNLEVVSFINLPNLSDAQKVHFEAVNCRLVQNCHNFSLTSASKSDDIDDIIDPLFDIDSDIYMELMVLLQSQPLKEAYKGHHTWNQSPTSEITREFADGVGIEAKAALGHIGHILTSPQMLLNEQSMDQQLLTNKQHSLGETETTNKPQLDGSVTPPEKTLAANSSTISETKKEQPIQLLGPKQMVFPLFWL* 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3474 1446 MobiDBLite consensus disorder prediction 1395 1428 - -
Psa5g3474 1446 Gene3D - 18 177 IPR027417 -
Psa5g3474 1446 Pfam NB-ARC domain 39 272 IPR002182 GO:0043531
Psa5g3474 1446 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 8 848 - -
Psa5g3474 1446 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1113 1270 - -
Psa5g3474 1446 SUPERFAMILY RNI-like 1080 1268 - -
Psa5g3474 1446 Gene3D Ribonuclease Inhibitor 1045 1254 IPR032675 -
Psa5g3474 1446 Gene3D Ribonuclease Inhibitor 609 856 IPR032675 -
Psa5g3474 1446 PRINTS Disease resistance protein signature 50 65 - -
Psa5g3474 1446 PRINTS Disease resistance protein signature 123 137 - -
Psa5g3474 1446 PRINTS Disease resistance protein signature 216 230 - -
Psa5g3474 1446 PRINTS Disease resistance protein signature 478 494 - -
Psa5g3474 1446 Gene3D - 181 274 IPR042197 -
Psa5g3474 1446 Gene3D Ribonuclease Inhibitor 350 603 IPR032675 -
Psa5g3474 1446 Coils Coil 1005 1025 - -
Psa5g3474 1446 PANTHER - 1113 1270 - -
Psa5g3474 1446 PANTHER - 8 848 - -
Psa5g3474 1446 MobiDBLite consensus disorder prediction 1395 1429 - -
Psa5g3474 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 285 IPR027417 -
Psa5g3474 1446 SUPERFAMILY L domain-like 345 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3474 Psa-Chr5 270658791 270668011 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3474 51 514 WRKY Transcription Factor Family AT5G45050 22.984 5.97e-14 75.5