Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3448 ATGGAAAAAGAAGATGAAGAAGAACTTCAGCTACCTAATGAGTTGCTTACTGTGCGGGACGACAATAGAAGGCTAATGCAAGACATAGATTGTGGAGGATTGTGCGGTTCGAGATGCGATATACATTCAAAGCCTAACTTGTGTAACAGATCATGTGGAACTTGTTGTGTGAGGTGCAAGTGTGTTCCACCTGGTACTTCTGGTAACAGGGAGCTTTGTGGGGCTTGTTACACCGATATGACCAACCATAACCTGCAAAAGAAACACATCAAACCAGAACAAATTTGCAATTTTGAGCCGATTGTGATTAAGAATGCACAGATGCCCCTTGGTCCCACTTCCATTTTATGCACGGGAGCAAGCGAATGCCGGTTCCAGGTTCTTGACTTAGGACTGCTTCCTGATTTCGTCTGTTCAACACTTGAGGATGTTGTCCATAGTTTGGCATTTGCGAAAGTGAAGTTAGCAGCTGGGCAACATTTCCTTTTGTCTTGCATCCAGAGGGTTTCTAGAATTCCCAACTTGACAAACCTGCGGTGGAAAGAAATGAAGAAGAATGAGGTTTGTAAGAAGAGAAAGACCAAGGTTGCTTCAGAAGATAATGCCTACTTACAAGTTTTGACAATCAAAGAGAATGCTCAGACGGAGTTGGCTAAAGATTCTTCAACTACAGCAGCAACAACCAACATCTACATCTATATGGATTCAAGAGTTAGAGCAGCTGCTTCTCCTAGAATCTTAAAAAAAAACGCTTCTAATAATGGTTCCTCGTTATTGCAGTCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCAAAGGTGGAGAGCATTCATCAGTACATGGAATCTATGAAATCAGCATACCTAGCTGATCAACGCCGCCGAGGGGAGGTGAATGATCCATTTCTAGAGGCTGACCAGCGAGAAACTGCAAGACCAGAAGCTGCATCAAAAAGAGTTCATCCTACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAAGAGCATTGACCGCCCAACAGACTGCTGCAACAACTTCATCTTTGTCAACAGGGAGTGGTTTGTCTCTTTTTAGCACGCCGACATTAACTCCCTCTCTGTTCGGTAATAATACTCCATTGTTTAGTTCAACTCCGGCTGCAAATTCACTCTTTTCAACTCCGTTTGCTTCAGTACACCATGTTGCCTTAACCAACAGATGCAAACTAATCCTGCATTTACAATAA 1281 0.4294 MEKEDEEELQLPNELLTVRDDNRRLMQDIDCGGLCGSRCDIHSKPNLCNRSCGTCCVRCKCVPPGTSGNRELCGACYTDMTNHNLQKKHIKPEQICNFEPIVIKNAQMPLGPTSILCTGASECRFQVLDLGLLPDFVCSTLEDVVHSLAFAKVKLAAGQHFLLSCIQRVSRIPNLTNLRWKEMKKNEVCKKRKTKVASEDNAYLQVLTIKENAQTELAKDSSTTAATTNIYIYMDSRVRAAASPRILKKNASNNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKSAYLADQRRRGEVNDPFLEADQRETARPEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQRALTAQQTAATTSSLSTGSGLSLFSTPTLTPSLFGNNTPLFSSTPAANSLFSTPFASVHHVALTNRCKLILHLQ* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3448 426 Gene3D - 234 303 - -
Psa5g3448 426 Pfam Gibberellin regulated protein 30 88 IPR003854 -
Psa5g3448 426 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 247 407 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3448 Psa-Chr5 268776571 268779167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3448 256 399 NAC Transcription Factor Family AT4G37130 59.880 1.14e-54 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3448 K14307 - gmx:100776992 231.876