Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3446 ATGAAAAATGGAGGGCCTGGTGTTGAAGAAATTGAACATGTTGATGCTGTTTTCGAATTGCTTAACCATATTTATGCTTTCTCGGCATCTGATTATATCCCATGGTTGAGGTTATTTGATTTTGATGGACATAAGGACAAGGTAAAAAATGCAATGAATATAATAAACAAGTATCATGATTCTCTCATTGAAGAGAGAGTTAAAAAATCAAAGAATGTTGAAGAAGATTTGCTAGATGTTTTGATTTCTTTAAAAGATGTCAATAATAATCCGTTATTGACGGTGAACGAAATCAAGACTCAAATTATTGAATTGATGATGGCAATTGTAGAAAATCCATCAAACGCGGCTGAATATACATTGGCCGAAATATTAAATCAACCTGTTCTATTTGAAAAAGCCATAGAAGAATTAGACAATATAGTTGGAAAAAATAGGTTGGTTCAAGAATCAGATATTCCTAAACTTAAATTCTTGAATGCTTGTGCAAGAGAAAGTTTTCGCCTTCATCCCATATCTGCTTTCAATCTTCCTCATCTTTCTACGAATGATACAATAGTTGGAAATTTCTTGATACCAAAGGGTAGCCATGTTTTGCTTGGAAGAACTGGTCTTGGGAGGAACCCAAAAGTTTGGACGGAACCTACAAAGGGTAGCCATGTTTTGCTTGGAAGAACTGGTCTTGGGAGGAACCCAAAAGTTTGGACGGAACCTTACAAATTTCAACCGGAACGTCATCTCAAGAATGATGGATATGATATATCTTTGACAGAACCGAACTTAAAGTTCATATCCTTTAGTACTGGAAGACGTGGTTGTCCTGGTGTCAAGCTTGGCACTACAATGACTATTCTTTTATTAGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCTCCCGATATATCAAAAATCAATCTTGATGAGCCATTGATGCTTGTAGCAAAGCCACGATTAAAAATAGATTTGTATAATTTTTTGTAG 984 0.3587 MKNGGPGVEEIEHVDAVFELLNHIYAFSASDYIPWLRLFDFDGHKDKVKNAMNIINKYHDSLIEERVKKSKNVEEDLLDVLISLKDVNNNPLLTVNEIKTQIIELMMAIVENPSNAAEYTLAEILNQPVLFEKAIEELDNIVGKNRLVQESDIPKLKFLNACARESFRLHPISAFNLPHLSTNDTIVGNFLIPKGSHVLLGRTGLGRNPKVWTEPTKGSHVLLGRTGLGRNPKVWTEPYKFQPERHLKNDGYDISLTEPNLKFISFSTGRRGCPGVKLGTTMTILLLARLLHGFTWSAPPDISKINLDEPLMLVAKPRLKIDLYNFL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3446 327 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 266 275 IPR017972 GO:0005506|GO:0016705
Psa5g3446 327 SUPERFAMILY Cytochrome P450 12 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 Gene3D Cytochrome P450 3 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 SUPERFAMILY Cytochrome P450 217 318 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 217 - -
Psa5g3446 327 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 217 323 - -
Psa5g3446 327 PRINTS E-class P450 group I signature 97 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 PRINTS E-class P450 group I signature 117 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 PRINTS E-class P450 group I signature 224 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 PRINTS E-class P450 group I signature 263 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 PRINTS E-class P450 group I signature 273 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 Pfam Cytochrome P450 217 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 Pfam Cytochrome P450 23 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 Gene3D Cytochrome P450 217 321 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3446 327 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 217 323 - -
Psa5g3446 327 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 5 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3446 Psa-Chr5 268703658 268704783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3446 4 324 Cytochrome P450 AT5G05260 47.605 4.21e-111 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3446 - K12153 lja:Lj0g3v0137329.1 412.535