Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3445 ATGAAGCCAAAAATACCAAAATTGCCACCAGGTCCCAAACCATGGCCTATTGTTGGCAATCTTCCTGAAATGCTTGCAAGCAAATCACCAACTGAGTGGATACACAAAACTATGGAAGAATTCAACACTGATATAGCATGTATTCGCCTAGGAAATGTCCATGTTATCCCAGTTACATGTCCCACAATTGCTCGTGAATTCTTGAGAAAACATGATGCTGATTTTGCATCAAGACCAAAAACCATGGCCACTCATATCATCACCAATGGCTACTTGACTTCAGCCCTTGTACCCTCCGGCCAACAATGGAAAAAGATGAAGAAAATCGTTGCGACTGATCCATTCAGACATCAATGGCTTCAACAAAAAAGAAACGAAGAAGCCGACAATCTTATGTTTTATGTCTACAACAAATGCAGCAATGGCCGAACTTGGCCTGGTGTTGAAGAAATTGAACATGTTGATGCTGTTTTCCAATTGCTTAACCATATTTATGCTTTCTCTGCATCTGATTATATTCCATGGTTGAGGTTATTTGATTTTGATGGACATAAGGACAAGGAATTGATGATGGCAATGGTAGACAATCCATCAAACGCAGTTGAATGGACATTGGCCGAAATGTTAAATCAACCTGTTCTATTAGAAAAAGCCATAGAAGAATTGGACAATATAGTTGGAAAAGATAGGCTGGTCCAAGAATCAGATATTCCTAATCTCAAATTCTTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTCCATCCCATATTTGCTTTCAATCTTCCTCATCTTTCTACGAATGATACAATAGTTGGAAATTTCTTGATACCAAAGGGTAGCCATGTTTTGCTTGGAAGAACTGGTCTTGGGAGGAACCCAAAAGTTTGGACGGAACCTACAAAGGGTAGCCATGTTTTGCTTGGAAGAACTGGTCTTGGGAGGAACCCAAAAGTTTGGACGGAACCTTACAAATTTCAACCGGAACGTCATCTCAAGAATGATGGATATGATATATCTTTGACAGAGCCGAACTTAAAGTTCATATCCTTTAGTACGGGAAGACGTGGTTGTCCTGGTGTCAAGCTTGGCACTACAATGACTATTCTTTTATTAGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACATCCCGATATATTAAAAATCAATCTTGATGAGCCACTTATGCTTGTAGCAAAGCCACGATTAAAAATAGATTTGTATAATTTTTGA 1233 0.3966 MKPKIPKLPPGPKPWPIVGNLPEMLASKSPTEWIHKTMEEFNTDIACIRLGNVHVIPVTCPTIAREFLRKHDADFASRPKTMATHIITNGYLTSALVPSGQQWKKMKKIVATDPFRHQWLQQKRNEEADNLMFYVYNKCSNGRTWPGVEEIEHVDAVFQLLNHIYAFSASDYIPWLRLFDFDGHKDKELMMAMVDNPSNAVEWTLAEMLNQPVLLEKAIEELDNIVGKDRLVQESDIPNLKFLKACAREAFRLHPIFAFNLPHLSTNDTIVGNFLIPKGSHVLLGRTGLGRNPKVWTEPTKGSHVLLGRTGLGRNPKVWTEPYKFQPERHLKNDGYDISLTEPNLKFISFSTGRRGCPGVKLGTTMTILLLARLLHGFTWSAHPDILKINLDEPLMLVAKPRLKIDLYNF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3445 410 Pfam Cytochrome P450 9 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 Pfam Cytochrome P450 188 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 Pfam Cytochrome P450 301 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 350 359 IPR017972 GO:0005506|GO:0016705
Psa5g3445 410 SUPERFAMILY Cytochrome P450 301 402 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 Gene3D Cytochrome P450 301 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 3 143 - -
Psa5g3445 410 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 187 301 - -
Psa5g3445 410 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 145 186 - -
Psa5g3445 410 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 301 407 - -
Psa5g3445 410 Gene3D Cytochrome P450 188 300 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 SUPERFAMILY Cytochrome P450 7 300 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 PRINTS E-class P450 group I signature 63 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 PRINTS E-class P450 group I signature 201 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 PRINTS E-class P450 group I signature 308 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 PRINTS E-class P450 group I signature 347 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 PRINTS E-class P450 group I signature 357 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3445 410 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 301 407 - -
Psa5g3445 410 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 145 186 - -
Psa5g3445 410 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 187 301 - -
Psa5g3445 410 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3445 Psa-Chr5 268598507 268600206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3445 8 408 Cytochrome P450 AT5G05260 40.625 8.15e-122 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3445 - - vra:106770481 482.256