Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3440 ATGATGAGTTACATTCGTAGTTTCCTTTTGCTATTTCCTCAATCCTTTAGGCCTGTTTTCCTTGTTATGTTTTTATGCTTTATGACTAACAAAATCCTACGATATCCTTTGATGAGTATGAAACCAAATATACCAAAATTGCCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTTGCAAGCAAATCTCCAACTAGGTGGATACACAAAATAATGGAAGAAATGAACACTGATATAGCATGTATCCGCCTAGGAAATGTCCATGTTATTCCTGTTACATGTCCCACCATTGCTCTTGAATTCTTGAGAAAACATGATGCTACTTTTGCATCAAGACCAATATCCATGTCCACTGATATCATCAGCAATGGTTTCTTGACAACAGCTGTTACACCCTTTGGAGAACAATGGAAGAAAATGAAGAAAATATTCGTCAACGAATTATTCTCTCCCCACAAACATCAATTACACACAAACAAAAGAAATGAAGAAGCTGATAACCTAATGTTTTATGTCTACAACAAATGCAAAAATGAGAATAATAACGGTCTTGTGAATGTTAGGAGCATTGCTCGACACTATTGTTGTAATTTGATGAGGAAACTGGTTTTTCATACAAGGTATTTCGGAGAAGGTAGGAATGATGGAGGTCCTGGTTTGGAGGAAGTTGAACATGTAGACGCTATTTTCACATTGCTTAAGTATGTTTATGCTTTTTGTGTTTCCGATTATATGCCATTGTTGAGAGGACTTGACATTGATGGACATGAGAGAAAGGTGAAGGATGCTATGAGTGTTGTGAAAAAGTGTAATGATCCAATCATTGAAAAGAGAATTGAAAAATGGAAAGATGGATCAAAGACTAGTGCTGCTGATGTAGAGGACATACTTGATATTCTAATCTCTGTCAAAGATGCGAACAACGAAGCATTATTGACATCAGAAGAAATCAAGGCTCAAGCTCTAGAACTTTTGTTGGGAGGAGTGGACAATCCATCGAATGCAGCAGAATTCGCGATATCAGAAATGATAAATCGGCCAGAGTTACTTCAACGAGCCACCGAAGAATTGGACAATATCGTAGGGAAACAAAGACTAGTCCAAGAATCAGACATTCCAAATCTCAACTATGTGAAAGCCTGTGCAAGAGAAGCTTTTCGTCTTCACCCCATTACAATATTCAATCCTCCCCATGTCTCAATGGAGAACACAATGATTGGTAATTACATGATCCCGAAAGGTAGCCATGTGCTTCTAAGCAAACAAGGACTCGGACGAAACCCAAAAGTTTGGAATGAACCTCACAAATTTAAACCAGAACGCCATCTAAAAAACGACGGCTCTATGGTAGTTTTGGCGGAACCAGATTTAAAGTTCATATCGTTTAGTACTGGAAGGCGTGCTTGTCCTGGAATTGTACTTGGAACCACAATGACTGTGATGTTATTGGGTAGGTTGCTCCATGGCTTCAACTGGAGTGGATCACCTAATGTATCAACCATAGATCTTCTTAAGTATTCCAATGGTGGTAGATACCTTGGAGGGCCACTTGTAGCAATAGCAAAGCCAAGATTGGCAGCAGAATTGTATCAACCATACAATATTTGA 1623 0.3888 MMSYIRSFLLLFPQSFRPVFLVMFLCFMTNKILRYPLMSMKPNIPKLPPGPKPWPIVGNLPEMLASKSPTRWIHKIMEEMNTDIACIRLGNVHVIPVTCPTIALEFLRKHDATFASRPISMSTDIISNGFLTTAVTPFGEQWKKMKKIFVNELFSPHKHQLHTNKRNEEADNLMFYVYNKCKNENNNGLVNVRSIARHYCCNLMRKLVFHTRYFGEGRNDGGPGLEEVEHVDAIFTLLKYVYAFCVSDYMPLLRGLDIDGHERKVKDAMSVVKKCNDPIIEKRIEKWKDGSKTSAADVEDILDILISVKDANNEALLTSEEIKAQALELLLGGVDNPSNAAEFAISEMINRPELLQRATEELDNIVGKQRLVQESDIPNLNYVKACAREAFRLHPITIFNPPHVSMENTMIGNYMIPKGSHVLLSKQGLGRNPKVWNEPHKFKPERHLKNDGSMVVLAEPDLKFISFSTGRRACPGIVLGTTMTVMLLGRLLHGFNWSGSPNVSTIDLLKYSNGGRYLGGPLVAIAKPRLAAELYQPYNI* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3440 540 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 19 535 - -
Psa5g3440 540 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 19 535 - -
Psa5g3440 540 SUPERFAMILY Cytochrome P450 48 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 Gene3D Cytochrome P450 37 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 Pfam Cytochrome P450 48 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Psa5g3440 540 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3440 540 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3440 Psa-Chr5 268368062 268370283 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3440 3 535 Cytochrome P450 AT4G39950 50.000 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3440 - K14984 gmx:100787378 740.339