Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3423 ATGAACCCTCAACAAGAATCGGAATTTGATTCTGGTGCTCTCAAACCTTATTATGGAAAGTTGTTTCCTTTTGCTGATATCTTTAAATGGATGTCTTATGGTCATGACGGGAAACATCCTGGGTGTGATCAGTCCTACTTTGGAAGAAGGGAATTTTCCTTCACTCTGAAAGGTGATATTTATCTGCGATTCCAATCTTACAACAATGCCGTCGAACTTGAAAACTCCATCAAAGACAAATGCCCTTTAAAGATTGACATTGGACCTGTCTACACAGTTGATCCTGCAAAAAGGCATGCCTATGCACAGGGTGGTAATAATGTCTTCACTCCAGTTGAGAGGGAGTTGATTTTTGATATAGATATGACAGATTATGATGATGTTAGATACTGCTGCGAGGGTGCTGATGTTTGCTTGGATTGCTGGCCATTGATGACCATAGCCATCAAAGTGATTGATACTTCCTTAAGAGATGAATTTGGTTTTAAGCATATACTCTGGGTCTATAGTGGACGTAGAGGTGTTCATTGTTGGGTGTGTGATGGGAAGGCAAGAAGGTTGACAAATGAGCAAAGATCTGCTATTGCTGAATATTATCGTGTTTACAAGGGCAATGAAAATAGTCAGAAGAAGGTTTCTTTGACTGGTGGCGCTCTTCATCCTTTCTTGGCGACATCATACACCAATGTCCTCAAGGACTATTTTGAGAAAAAACTGCTTACAAATCAAAACTTACTTGCTACTGAGGAGAGATATGAGAAGATCCTAAGCATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAATAGACGGTCCTCTAGTGCAAAAGAAGATATTAATGTTGTGCGATGGGAACAGTGCAAGCAGTTGCTGCAATCTGGAAAGCATAAGGGGTTGCGGAGATGTGTTGAAGAAATTGTGTTTTCCTTTACTTACCCCAGGCTAGATATGGAGGTTTCAAAACATATGAATCATTTGCTTAAAGCACCGTTTTGTGTACATCCAAAAACAGGTCGTGTCTGTGTCCCTATTGACCCAAATCGGTGTGACGAGTTTGATCCTACTACAGTACCCACCCTTTTCCAGCTTCTAGAGGAGATTAATAATGAAGGCTTGAGAGCTGATGTTAATGGTGAATGGAGTGGAACTTCTCTTGGAAATTCTGTCAGGCTTTTCAGATCTTCATTCTTGGAACCTTTGCAGAAAGCCTGCAAGGAGGATATAGAAAGATCCTATAATCTGAAGTTGCAGCAGTCAAAGAACTCCATAGGTTGGTAG 1296 0.4074 MNPQQESEFDSGALKPYYGKLFPFADIFKWMSYGHDGKHPGCDQSYFGRREFSFTLKGDIYLRFQSYNNAVELENSIKDKCPLKIDIGPVYTVDPAKRHAYAQGGNNVFTPVERELIFDIDMTDYDDVRYCCEGADVCLDCWPLMTIAIKVIDTSLRDEFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRSAIAEYYRVYKGNENSQKKVSLTGGALHPFLATSYTNVLKDYFEKKLLTNQNLLATEERYEKILSMIPDESIASELRGRWQDNRRSSSAKEDINVVRWEQCKQLLQSGKHKGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLFQLLEEINNEGLRADVNGEWSGTSLGNSVRLFRSSFLEPLQKACKEDIERSYNLKLQQSKNSIGW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3423 431 Gene3D DNA primase, PRIM domain 2 412 - -
Psa5g3423 431 PANTHER DNA PRIMASE 20 431 - -
Psa5g3423 431 SUPERFAMILY Prim-pol domain 12 375 - -
Psa5g3423 431 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 15 369 IPR014052 GO:0003896|GO:0006269
Psa5g3423 431 CDD AE_Prim_S 23 360 IPR014052 GO:0003896|GO:0006269
Psa5g3423 431 PANTHER DNA PRIMASE SMALL SUBUNIT 20 431 IPR014052 GO:0003896|GO:0006269
Psa5g3423 431 Pfam DNA primase small subunit 118 351 IPR002755 GO:0003896|GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3423 3 431 Core DNA Replication Machinery Family AT5G41880 67.361 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3423 K02684 - gmx:100780574 769.229