Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3420 ATGCGATTGCCTGAACTCGAACGAAGCAGAAAAATGGTAGATTTGGAAGGCTTTTTGTCAGACAGCATCGTGAAAGCCCGAGAATTGTTGAAAAAACAAATCGAGGAAAACCAGAAGAAGGAAATGGCTTATCTTATTACTCAATTTATCCATACCGGTGAATATAACATGGAAAATATGAGCTTGACTAAGGTAACTAGCCTGACAGCCTTTATTGACAAGAGTCTGAAGGAAGTTGAGCAGAGATTGGCTTCAACAGATGTCCATGACCAAGAGGTTGTTGCAAATGGTGCTAGAGCTCTTAACGAAGGAGATATGCTGGCGAATATGGATCATGCTACTAACCAAGGTTTGGACATGAACAATAATTATGGTATGCATAGTGATGATCAATTTTCTATCAACTTCTCTGAGCTAGAATTTAACGATGCTAATTTCAATCCAAATGGATTTTGA 456 0.386 MRLPELERSRKMVDLEGFLSDSIVKARELLKKQIEENQKKEMAYLITQFIHTGEYNMENMSLTKVTSLTAFIDKSLKEVEQRLASTDVHDQEVVANGARALNEGDMLANMDHATNQGLDMNNNYGMHSDDQFSINFSELEFNDANFNPNGF* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3420 151 Coils Coil 23 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3420 Psa-Chr5 267265550 267266370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3420 3 106 Type I MADS-box Gene Family AT5G48670 31.193 3.65e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3420 - K09880 cam:101511888 130.568