Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3416 ATGGCTTCTCATCATATCCAATATTTCATTGTTATTCTTATGTCCACATTTCTCACAATTCATTCCTTTGAAGAACTAACTCCTGATTTTTACAATGATGTTTGTCCTGAGGCACTGCCAATCATTCACTCAATTGTTCTCCAAAAACTTAACATTAAACCACGCATGGGAGCACATTTACTACGCTTGCATTTCCATGACTGTTTTGTCAATTTGGGAGGACCAAGCTATTGGTACGAAGTTCCACTAGGAAGAAGAGACGCAAGAAATGCTATAAAGAAAGATGCAGATTTTTATCTTCCTTCACAGCTTTTCAATTTCTCTCAACTTGTTTCTAACTTTGAGTTTCAAGGCCTAAACATTAAAGATCTCGTAGCACTTTCCGGTGCTCACACGATTGGAATGGCTAAATGTTCTAGTTTTAAGGAAAGGATTTACAATGACACGAATATAGATCCCGATTTCGCAATCTCCATGCAAGAAAATTGTCCTATAAAAGGCTGTGATGATCATTTTGAAGCATTTGATCATGTCACTCCTAATAAGTTTGACAATTCATATTACAAAAATTTGATTAATAAAAAAGGTTTACTACATTCTGATCAAGAGCTTTTTAAAGATGATGATGGTGGCGAAAGTGATAGATTGGTGAGACGTTATAGTAGAAATCCTCATGCTTTTGCTAGAGATTTTAAAGCTTCCATGATTAAGATGGGTAATATAAAGCCTCTTACTGGAATCTTTGGAGAGATTAGAAGAGATTGTAGCAAAGTTAACTCATACTTACATGGTTTAAATGAGTGA 804 0.3507 MASHHIQYFIVILMSTFLTIHSFEELTPDFYNDVCPEALPIIHSIVLQKLNIKPRMGAHLLRLHFHDCFVNLGGPSYWYEVPLGRRDARNAIKKDADFYLPSQLFNFSQLVSNFEFQGLNIKDLVALSGAHTIGMAKCSSFKERIYNDTNIDPDFAISMQENCPIKGCDDHFEAFDHVTPNKFDNSYYKNLINKKGLLHSDQELFKDDDGGESDRLVRRYSRNPHAFARDFKASMIKMGNIKPLTGIFGEIRRDCSKVNSYLHGLNE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3416 267 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 PANTHER CATIONIC PEROXIDASE 5 71 - -
Psa5g3416 267 PANTHER CATIONIC PEROXIDASE 72 259 - -
Psa5g3416 267 CDD secretory_peroxidase 25 258 IPR033905 GO:0004601|GO:0042744
Psa5g3416 267 ProSitePatterns Peroxidases proximal heme-ligand signature. 123 133 IPR019793 -
Psa5g3416 267 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 Pfam Peroxidase 72 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 Gene3D - 74 259 - -
Psa5g3416 267 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Psa5g3416 267 PANTHER PEROXIDASE 72-RELATED 72 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 PANTHER PEROXIDASE 72-RELATED 5 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 SUPERFAMILY Heme-dependent peroxidases 26 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g3416 267 Gene3D Peroxidase, domain 2 101 239 - -
Psa5g3416 267 Gene3D - 26 72 - -
Psa5g3416 267 ProSiteProfiles Plant heme peroxidase family profile. 58 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3416 Psa-Chr5 267121110 267122266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3416 25 71 Peroxidase AT5G05340 48.936 3.12e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3416 K00430 - gmx:100816580 241.121