LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g3416	ATGGCTTCTCATCATATCCAATATTTCATTGTTATTCTTATGTCCACATTTCTCACAATTCATTCCTTTGAAGAACTAACTCCTGATTTTTACAATGATGTTTGTCCTGAGGCACTGCCAATCATTCACTCAATTGTTCTCCAAAAACTTAACATTAAACCACGCATGGGAGCACATTTACTACGCTTGCATTTCCATGACTGTTTTGTCAATTTGGGAGGACCAAGCTATTGGTACGAAGTTCCACTAGGAAGAAGAGACGCAAGAAATGCTATAAAGAAAGATGCAGATTTTTATCTTCCTTCACAGCTTTTCAATTTCTCTCAACTTGTTTCTAACTTTGAGTTTCAAGGCCTAAACATTAAAGATCTCGTAGCACTTTCCGGTGCTCACACGATTGGAATGGCTAAATGTTCTAGTTTTAAGGAAAGGATTTACAATGACACGAATATAGATCCCGATTTCGCAATCTCCATGCAAGAAAATTGTCCTATAAAAGGCTGTGATGATCATTTTGAAGCATTTGATCATGTCACTCCTAATAAGTTTGACAATTCATATTACAAAAATTTGATTAATAAAAAAGGTTTACTACATTCTGATCAAGAGCTTTTTAAAGATGATGATGGTGGCGAAAGTGATAGATTGGTGAGACGTTATAGTAGAAATCCTCATGCTTTTGCTAGAGATTTTAAAGCTTCCATGATTAAGATGGGTAATATAAAGCCTCTTACTGGAATCTTTGGAGAGATTAGAAGAGATTGTAGCAAAGTTAACTCATACTTACATGGTTTAAATGAGTGA	804	0.3507	MASHHIQYFIVILMSTFLTIHSFEELTPDFYNDVCPEALPIIHSIVLQKLNIKPRMGAHLLRLHFHDCFVNLGGPSYWYEVPLGRRDARNAIKKDADFYLPSQLFNFSQLVSNFEFQGLNIKDLVALSGAHTIGMAKCSSFKERIYNDTNIDPDFAISMQENCPIKGCDDHFEAFDHVTPNKFDNSYYKNLINKKGLLHSDQELFKDDDGGESDRLVRRYSRNPHAFARDFKASMIKMGNIKPLTGIFGEIRRDCSKVNSYLHGLNE*	268

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g3416	267	PRINTS	Plant peroxidase signature	35	54	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g3416	267	PRINTS	Plant peroxidase signature	59	79	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g3416	267	PANTHER	CATIONIC PEROXIDASE	5	71	-	-
	Psa5g3416	267	PANTHER	CATIONIC PEROXIDASE	72	259	-	-
	Psa5g3416	267	CDD	secretory_peroxidase	25	258	IPR033905	GO:0004601\|GO:0042744
	Psa5g3416	267	ProSitePatterns	Peroxidases proximal heme-ligand signature.	123	133	IPR019793	-
	Psa5g3416	267	PRINTS	Haem peroxidase superfamily signature	57	71	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g3416	267	PRINTS	Haem peroxidase superfamily signature	119	136	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g3416	267	PRINTS	Haem peroxidase superfamily signature	176	191	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa5g3416	267	Pfam	Peroxidase	72	222	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g3416	Psa-Chr5	267121110	267122266	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g3416	25	71	Peroxidase	AT5G05340	48.936	3.12e-10	57.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g3416	K00430		-	gmx:100816580	241.121

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