Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3414 ATGGCAGATGAAGCACAAATTGATGTGAAGGAGGAGGTTCCTGATATTGCACCATTTGATCCTACTAAAAAGAAGAAGAAAAAGAAACCCGCAGTTGTAGATCTTGATGATGATTCGGTAGACAAGTTGGCTGAGAAGACAGAAAATCTGTCAGTTTCTGAGGGGTTTGACAGTACGTTAGCTGGTGCGAAAAAGAAGAAAAAGAAGCCAGTTGAAATCAGTAACTTAATTGAAGAGACTAGTGATGTGAAAAATGAAGATTTGGATGATCATGCTGAAGAAGATGACCAAGAGGCTGTTTCCTTGCAACCTCGTTACCCTTGGGAAGGGAGTGATCGCGATTATCAATACGAGGAGCTTTTAGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCCGAACTTGCGGGAGACCGGCGAAGGACTGTTATGAGGCCTCCACAAGTGCTTCGCGAGGGCACAAAGAAAACTGTGTTTGTGAATTTTATGGACCTTTGCAAAACGATGCATCGGCAGCCAGATCATGTCATGGCTTTCTTGCTTGCAGAATTGGGTACAAGTGGTTCTCTAGATGGACAGCAGAGGTTGGTTGTCAAGGGAAGGTTTGCGCCAAAGAATTTTGAAGGAATTTTGCGTCGATACGTCAATGAATACGTAATTTGCCTTGGATGCAAAAGTCCCGACACAATACTTTCTAAGGAAAACCGTTTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCACCGATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGGAGAACTGCAGGAGGGACATGA 813 0.4416 MADEAQIDVKEEVPDIAPFDPTKKKKKKKPAVVDLDDDSVDKLAEKTENLSVSEGFDSTLAGAKKKKKKPVEISNLIEETSDVKNEDLDDHAEEDDQEAVSLQPRYPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRTAGGT* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3414 270 MobiDBLite consensus disorder prediction 1 104 - -
Psa5g3414 270 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Psa5g3414 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
Psa5g3414 270 Gene3D - 112 254 - -
Psa5g3414 270 MobiDBLite consensus disorder prediction 60 87 - -
Psa5g3414 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Psa5g3414 270 MobiDBLite consensus disorder prediction 1 48 - -
Psa5g3414 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 268 IPR045196 GO:0003743|GO:0006413
Psa5g3414 270 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Psa5g3414 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3414 Psa-Chr5 267089941 267093150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3414 1 265 Eukaryotic Initiation Factors Gene Family AT5G20920 73.507 5.56e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3414 K03238 - gmx:100783618 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3414 5 267089941 267093150 Psa5g3414 5 267089941 267093150 ECH