Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3383 ATGGCAATGGTAGACAATCCATCAAACGCGGCTGAATATACATTGGCCAAAATATTAAATCAACCTGTTCTATTTGAAAAAGCCATAGAAGAATTGGACAATATAGTTGGAAAAGATAGGTTGGTTCAAGAATCAGATATTCCTAAACTTAAATTCTTGAATGCTTGTGCAAGAGAAAGTTTTCGCCTCCATCCCATATCTGCTTTCAATCTTCCTCATCTTTCTACGAATGATACAATAGTTGGAAATTTCTTGATAACAAAGGGTAGCCATGTATTGCTTGGAAGAACTGGTCTAGGGAGGAATCCAAAAGTTTGGACGGAACCTTACAAATTTCAACCAGAACGTCATCTCAAGAATGATGGATATGATATATCTTTGACAGAGTCGAATTTAAAGTTCATATCTTTTAGTACTGGAAGACGTGGTTGTCCTGGTGTGAAGCTTGGTACCATAATGACTATCTTTTTATTAGCTAGGTTTCTCCATGGCTTCACTTGGAGTGCACCTCCCGATATATGA 522 0.3736 MAMVDNPSNAAEYTLAKILNQPVLFEKAIEELDNIVGKDRLVQESDIPKLKFLNACARESFRLHPISAFNLPHLSTNDTIVGNFLITKGSHVLLGRTGLGRNPKVWTEPYKFQPERHLKNDGYDISLTESNLKFISFSTGRRGCPGVKLGTIMTIFLLARFLHGFTWSAPPDI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3383 173 PRINTS E-class P450 group I signature 11 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3383 173 PRINTS E-class P450 group I signature 54 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3383 173 PRINTS E-class P450 group I signature 95 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3383 173 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3383 173 PRINTS E-class P450 group I signature 144 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3383 173 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 1 172 - -
Psa5g3383 173 Pfam Cytochrome P450 2 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3383 173 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 172 - -
Psa5g3383 173 SUPERFAMILY Cytochrome P450 4 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3383 173 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 137 146 IPR017972 GO:0005506|GO:0016705
Psa5g3383 173 Gene3D Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3383 Psa-Chr5 265047685 265048206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3383 1 171 Cytochrome P450 AT5G05260 57.310 1.42e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3383 - K12153 pvu:PHAVU_006G0788000 262.307