LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g3382	ATGTTTTTTGTCTTTATGATTATTAAATCCCTAAGATATCACTTGGTGAATATGAAGCCAAAAATACCAAAATTGCCACCAGGTCCCAAACCATGGCCTATTGTTGGCAATCTTCCTGAAATGTTTGCAAGCAAATCACCAACTGAATGGATACACAAAACTATGGAAGAATTCAACACTGATATAGCATGTATTCGCCTGGGAAATGTCCATGTTATCCCAGTTACATGTCCAACCATTGCTCGTGAATTCTTGAGAAAATATGATGCTGATTTTGCATCAAGACCAATAAGCATGGCAACTGATATCATCTCCAATGGACACTTAACCACAATTCTTGTACCCTTAGGAGAACAGTGGAAAAAGATGAAGAAAATCATTGCTAATGATTTGTTCTCACCACTCAGGAATCAATGGCTTCAAGATAAAAGAAACGAAGAAGCCGATAATCTAATGTTTTATGTGTACAACAAATGCAGCAATGGTGAACTTGTGAATGTTAGAATTGCAACACAACATTATTGTGGAAATGTTTATAGGAAAATGTTTTTTAATACAAGATACTTTGGAAATGGAATGAAAGATGGAGGGCCTGGTGTTGAAGAAAAAGAACATGTTGATGCTGTTTTTGTTTTGCTTAATCATGTTTATGCTTTCTCTGCGTCCGATTATATTCCATGGTTGAGGTTATTTGATTTAGATGGACATAAAGGCATGGTAAAAGATTCATTGAAGATAATGAACAAGTATCATGATTCTCTCATTGAAGAGAGGATCAAACAATGGAATGATGGATCAAAGAATATTGAAGAGGACTTGCTAGATGTTTTGATTTCATTAAAAGATATCAACAATAATTCCTTATTGACAATTAAGGAAATCAAAGCTCAAATCATCGAATTAATGATGGCAATGGTAGACAATCCATCAAACGCAGTTGAATGGACATTGGCCGAAATGTTAAATCAACCTGTTCTATTTGAAAAAGCCATACAAGAATTGGACAATATAGTTGGAAAAGATAGGTTGGTTCAAGAATCAGATATTCCTAAACTCAAATTCTTGAAGGCTTATGCAAGAGAAAGTTTTCGCCTCCATCCAATTACAACTTTCAATGCTCCCCATGTCTCAATGAATGATACAATAGTTGGAAATTTCTTGATACCAAAGGGTAGCCATGTTTTGCTTGGAAGAACTGGTCTTGGGAGAAACCCAAAAGTTTGGACGGAACCTTACAAATTTCAACCGGAACGTCATCTCAAGAATGATGGATATGATATATCTTTGACAGAGCCGAATTTAAAGTTCATATCCTTTAGTACGGGAAGACGTGGTTGTCCTGGTGTCAAGCTTGGCACTACAATGACTATTCTTTTATTAGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCTCCCGATATATCAAAAATCAATCTTGTCGAATCCAAAGGTGTTATGTTTCTTGATGAGCCATTAAGAATTGTAGCGAGGCCTCGGTTAAAAAGAGATTTGTATAGGGACCGAGTTTCCCTGCAGTCATTAAATCACACATTCATGTAG	1563	0.3634	MFFVFMIIKSLRYHLVNMKPKIPKLPPGPKPWPIVGNLPEMFASKSPTEWIHKTMEEFNTDIACIRLGNVHVIPVTCPTIAREFLRKYDADFASRPISMATDIISNGHLTTILVPLGEQWKKMKKIIANDLFSPLRNQWLQDKRNEEADNLMFYVYNKCSNGELVNVRIATQHYCGNVYRKMFFNTRYFGNGMKDGGPGVEEKEHVDAVFVLLNHVYAFSASDYIPWLRLFDLDGHKGMVKDSLKIMNKYHDSLIEERIKQWNDGSKNIEEDLLDVLISLKDINNNSLLTIKEIKAQIIELMMAMVDNPSNAVEWTLAEMLNQPVLFEKAIQELDNIVGKDRLVQESDIPKLKFLKAYARESFRLHPITTFNAPHVSMNDTIVGNFLIPKGSHVLLGRTGLGRNPKVWTEPYKFQPERHLKNDGYDISLTEPNLKFISFSTGRRGCPGVKLGTTMTILLLARLLHGFTWSAPPDISKINLVESKGVMFLDEPLRIVARPRLKRDLYRDRVSLQSLNHTFM*	521

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g3382	520	Gene3D	Cytochrome P450	19	509	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Psa5g3382	520	PANTHER	P450 FAMILY PROTEIN, PUTATIVE-RELATED	3	506	-	-
	Psa5g3382	520	SUPERFAMILY	Cytochrome P450	26	500	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Psa5g3382	520	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	3	506	-	-
	Psa5g3382	520	Pfam	Cytochrome P450	26	493	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Psa5g3382	520	PRINTS	E-class P450 group I signature	80	101	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Psa5g3382	520	PRINTS	E-class P450 group I signature	293	310	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Psa5g3382	520	PRINTS	E-class P450 group I signature	313	339	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Psa5g3382	520	PRINTS	E-class P450 group I signature	356	374	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Psa5g3382	520	PRINTS	E-class P450 group I signature	397	421	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g3382	Psa-Chr5	265001601	265004398	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g3382	2	506	Cytochrome P450	AT4G39950	51.383	0.0	555

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g3382	-		K12153	gmx:100809902	697.582

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