Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3371 ATGTTGCTGATTCCTGCAGGACTGGTGCTGCTAAATGTTATCTTTGGTCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCATATTGTATTTTTGTAAGTTTCAGTTTTGCTGCTATGTATGGTGTTGCTGTTGCTGCACTTGGAATGTTGAGTACTATAGCAACCGGATTAGCCATCGATGCATATGGTCCAATCAGTGACAATGCCGGAGGGTTTGCTATTGGTTCTGCCGCCCTTGTGTTCTTTGGCCTTTTTGGTGCCTTTGTGAGCCGTGCTGGTGTTACAACCGTCGATGTCCTGACTCCCAAGGTTTTCATCGGACTGATTGTGGGCGCCATGCTCCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTCGGAAGTGCAGCATTGAAGATGGTTGAGGAAGTTCGCAGGCAATTCAACACGATTCCTGGATTGATGGAGAATGCGAACCTGACTATGCCACATGTGTGA 492 0.4634 MLLIPAGLVLLNVIFGLALGYKSVIIPIFAIAYCIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGFAIGSAALVFFGLFGAFVSRAGVTTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMENANLTMPHV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3371 163 Pfam Inorganic H+ pyrophosphatase 76 156 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g3371 163 Pfam Inorganic H+ pyrophosphatase 11 77 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g3371 163 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 11 78 - -
Psa5g3371 163 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 76 156 - -
Psa5g3371 163 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 76 156 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g3371 163 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 11 78 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3371 Psa-Chr5 263096161 263096831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3371 12 154 Primary Pumps ATPases AT1G15690 77.011 4.48e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3371 K23025 - cit:102578049 243.047