Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3366 ATGGAAACTAGAAGAGGCAACGGAACCGTTTCAGTTTCTTACGATACCCATGGATTGTTGGAAGTTTGTGTAAAAAATGATAGAAATGTTGGCTCTTATGGCATTTTCTTGGGAGACAATCCATTGGAATTCGCTCTTCCTGCAACATTGTTCCAACTCATTGTTGTCATCACAATCTCTCAAACGCTTTACTTTCTTCTCCGGCCGTTACAAACCCCCAAATTCATCTGCAGCCTTCTCGGTGGAATTCTGTTGGGGCCATCATTTCTAGGGAGGAATGAAATTTACTGGAAAGCATTATTTCCGGCGAGACAAGCTGATGTTTTAGTAGTGACGTCGATAATCGGAGTAATATACTTTCTGTTCTTTATTGCGCTGAAAATGGATCTACTAATGACGGTAAGAGCAGCAAAGAGTACATGGCGACTCGGAATAATACCTTTCATGGCGTCTTTTATAGTGATATCGACGCTTATAAATGTTTACTATTTACCACATAATTTTCCTCATCTCAAATCAGATACGTCGCGTTCAGCATTAAGTGCTACAATGGCATTTAGTAATTTCCCTGTTGTGTCCGAAGCTTTGATAGAATTGAACCTCATAGCAACTGAATTAGGACAGATTGCTCTGTCTTCCGCCACGCTCAACGACTGCATACAGTTTTCTATCATAGTATCGCACCATCTCATGGATACTGAGAAAGTGGAATATTTAGTCTTAGGTACGTTGAGTTGGATTTTGTTTTTGCTTTGTAGCTTCTTCATTTTAAGACCAATTATGAAGATAATTGCACGCAACACGCCCATTGGGAAACCGGTGAAACGGGTTTATGTTGTGTTTATTCTTCTCGGTGCTTTAGTTATGGCCGGTATAACTGATATAATCGGGGTCACGTTTCTTATTGGACCATTGATTTATGGTTTGGTTATACCAAGTGGACCTCCTTTGGGGACAACATTGGTTGAGAAATGTGAAGTTATTATCTTAGAATTTCTGTTACCTTTCTTCTTTGCTGATGTTGGCATGACCACAAATCTCACTGCACTTCGCAATTGGAGAGAGTTTGTAACTTTGCAACTTATATTATTCGCGGGAGACGTAGCCAAGGTTATTGCTTGCGTGTTGGTTTCTATGACATATAACATTAAGCCCAAAAATGGGACGGTGCTCGGACTCATGTTGAACATTAAGGGCGTCACTCACCTGATTGCTCTTACTAAATTAAGGAAACTCAAGATATTGGATGATGAAACATTCAGTCACTTGGTCCTTTCTGTGATGCTTATGACCGGATTAATCACACCTATTATTACAATATTATACAAGCATCGTCCTCGAGCACTAAAGTCATCAAACATACATGATGGTCAGATGAGAACAATCCAAAACTCTTCTAGAAATTCAGAGCTTCGCGTTGTTACTTGTTTATACAACGAAGGAAATGTACGTGGTATCACTGCTCTGTTAGAGGTTTGCAACCCAGTTCCAGCTAGCCCGTTAGGTGTCTATGTGATTCATCTCATCGAGCTTTTAGGAAAAAGTGCACCAATCTTGCTTCCAATTAATTACAGACGAAACAAACAACTATTGTCTGTGAATTACCCCGACACTAACCACATCATGCAGGCATTTGAGAATTACTCTAACAACTCTTCTGGTCCGGTTATTGTTTTACCGTATGTCAACGTGGCACCTTATAAGAGTATGCACGATGCTGTTGTCAACTTAGCACAAGACAAATTGGCTGCTCTTATTATAGTCCCTTTTCACGAAAATGACCATATTGATCTCAATGGACACGTATCAACTTCAATTCGAAAACTCAACACTAGGTTTCAAGCGCACGTGCCTTGCACGTTGGGGATATTGGTCGATAGATACTCGCGACTTGGCGTGAGGACTGATCACACGAAACCTTATTTCCATGTCGGGATATTTTTCATTGGCGGGCCTGATGACAGAGAAGCATTGGCTTTGGGAATTCGAATGTCGGATAGAGAGAATATGAAGGTGTCCTTGTTTCGGTTCGTTGTGATGAATAAAAAACATTGTGTAGGTAAATCTCTATCAGGTAGAGAAATGACAGTAAGTGAGCAAGAGTACGATGACATGTTGGACGAAGGTTTAATCGACGAGTTTAAAAGTATGAAATTTGGGGTTGGGAGTGTTTGTTGGTACGAGGTTGTGGTGGAGGATGGAGTAGAGGTAATGAGTGCAATTCGTACTTTGGAAGGAGACTATGATCTTGTGATGGTTGGGAAGAGACATAATATAGGCTCTTTAAAAGATGAAGAAATGGGAAATTTCATAGAGAATGTTCAAATATTAGGGATATATGGAGATATGTTGTCATCAACAGAGTTCTGTATTGGAATGGTTCCTGTTTTGGTGACACAATGTGGTGGGGATAAAAGAGCAATGAGGTTTGATAGAGTAGGTTCAAATAATGTATCTGAAAAAAGTTTAAATTATGGATCTCAGACAAGTTTAAATGTTAATAAATAA 2508 0.3971 METRRGNGTVSVSYDTHGLLEVCVKNDRNVGSYGIFLGDNPLEFALPATLFQLIVVITISQTLYFLLRPLQTPKFICSLLGGILLGPSFLGRNEIYWKALFPARQADVLVVTSIIGVIYFLFFIALKMDLLMTVRAAKSTWRLGIIPFMASFIVISTLINVYYLPHNFPHLKSDTSRSALSATMAFSNFPVVSEALIELNLIATELGQIALSSATLNDCIQFSIIVSHHLMDTEKVEYLVLGTLSWILFLLCSFFILRPIMKIIARNTPIGKPVKRVYVVFILLGALVMAGITDIIGVTFLIGPLIYGLVIPSGPPLGTTLVEKCEVIILEFLLPFFFADVGMTTNLTALRNWREFVTLQLILFAGDVAKVIACVLVSMTYNIKPKNGTVLGLMLNIKGVTHLIALTKLRKLKILDDETFSHLVLSVMLMTGLITPIITILYKHRPRALKSSNIHDGQMRTIQNSSRNSELRVVTCLYNEGNVRGITALLEVCNPVPASPLGVYVIHLIELLGKSAPILLPINYRRNKQLLSVNYPDTNHIMQAFENYSNNSSGPVIVLPYVNVAPYKSMHDAVVNLAQDKLAALIIVPFHENDHIDLNGHVSTSIRKLNTRFQAHVPCTLGILVDRYSRLGVRTDHTKPYFHVGIFFIGGPDDREALALGIRMSDRENMKVSLFRFVVMNKKHCVGKSLSGREMTVSEQEYDDMLDEGLIDEFKSMKFGVGSVCWYEVVVEDGVEVMSAIRTLEGDYDLVMVGKRHNIGSLKDEEMGNFIENVQILGIYGDMLSSTEFCIGMVPVLVTQCGGDKRAMRFDRVGSNNVSEKSLNYGSQTSLNVNK* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3366 835 PANTHER CATION/H + ANTIPORTER 4 807 - -
Psa5g3366 835 Gene3D - 47 450 IPR038770 -
Psa5g3366 835 PANTHER CATION/H+ EXCHANGER 3 4 807 - -
Psa5g3366 835 Pfam Sodium/hydrogen exchanger family 54 438 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3366 Psa-Chr5 262552439 262555379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3366 34 800 Antiporter Super Family AT2G13620 33.892 9.26e-143 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3366 - - gmx:106794183 1066.22