Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g3320 | ATGATGATGCAACTTAAAGTAGTCCTCACAACGTTGGTGTGTTGGAGCATAATAATTAGTTATCACTGTGTAGTTGGAGATTCACAAACAAGTACTGTACTGAACAGTGGATGCAGCACATTTAACGCATCAAATTTGCGTAGCTTCTATGCAAACATTAATGGAACATTTTCAGATTTGAGAAATCAAATTAGCAATGGAAGCAAACACTTTGCAATAGCACAAGAGGCGAGAGGAGAGGTAATAGTATATTCTCTTTTTCAATGCAGAAATTACCTCTCCAAAAAGGATTGTGTTGCTTGCTTCAACACCGCTTCTACTCAAATTCGTAACTGTTCAGCTTCCAATGGTGCCAGACTCATATATGATGGATGTTTCCTAAGGTACGAGAGTGAAAGATTCTACGATCAAACAAAACAACCTGGGGGTGGTATATTATGTGGGAACAAGACTGCAAAGGAAGGTGCCTCTTTTGGAACTACTGGACAAAAAGTGCTAATGGATCTCCAATTAGCAACACCAAAAATTAAAGGCTTTTTTGCAGCTACGAAGACTCTGGTGAATCCTGGTAGCAATAGTTCAATTTATGCCATTGCACAGTGTGTCGAAACTGCCACAGAAAGTACTTGTCTTGATTGCATGACAGCTGGACTCAACAACTTGCAAACTTGTCTCCCTAATACAGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATATTCGGAGACACCCTTTTTTGCTGATAATCAGGCCATTGATATCACAAACTATTTAAATCAAGGAGGTTCAAGCAACAAATGGGCCATTATAGGTGGTGTTGTTGGAGGTGTAGGTCTTGTTGCGATCCTTCTTGCAATTTTAGCTTGGCGACAATACAGAAAACCCAAGAGAGCTCCTAGAGGCAACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAACTACAAGTATAGTGATTTGAAAGCTGCAACAAAAAACTTCAGTGAAGAAAATAAACTGGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAATGTTGTAGCAGTCAAGAAACTGGTTTTGGGAAAATCCAGCAAGATAGACAATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCATAGGAATCTTGTTAGACTTCTTGGTTGTTGCAGTAAAAAACAAGAGAGAATCCTTGTTTATGAATACATGGCAAACAGCAGCCTAGACAAATTCTTATTCGGTGACAGACAAGGTTCCCTCAATTGGAAACAAAGGCGTGGTATAATTTTAGGCACAGCAAGGGGACTGGCCTATCTACATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGACTAGCAATATCCTCCTTGATGATAATCTTCATCCCAAAATTGCTGATTTTGGATTGGCGCGGCTTCTGCCGGGGGATCGATCTCATCTAAGCACAGGAGTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAATTATCAGAAAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTAGAAATCATAAGCGGTCAAAAGAGTACAGAAGTGAAGAAAGATGATGATGGTGAATACCTTCTTCAAAAATCATGGAAACTGCATGAGAGAGGCATGCACTTGGAGCTCATGGACAAGGCTTTAGACCCTAATGACTATGATGGAGAAGAAGTGAAGAAAATGATAGAGATTGCTTTACTATGCACTCAAGCATCAGCAGGAATGAGACCAACAATGTCTGAAGTAGTAGTTCTCCTCCAAACCAGGAGTTTAGTGGAGCACCTACAACCAACTATGCCTGTGTTTGTAGATACGAATCTTAGGTCTCGTGAAGGACACTCTACCTCAACTGGTTCTTCTACATCTAATGCTACTGCCTCCTTTTCAATTTTATCAGCTCGATGA | 1944 | 0.4017 | MMMQLKVVLTTLVCWSIIISYHCVVGDSQTSTVLNSGCSTFNASNLRSFYANINGTFSDLRNQISNGSKHFAIAQEARGEVIVYSLFQCRNYLSKKDCVACFNTASTQIRNCSASNGARLIYDGCFLRYESERFYDQTKQPGGGILCGNKTAKEGASFGTTGQKVLMDLQLATPKIKGFFAATKTLVNPGSNSSIYAIAQCVETATESTCLDCMTAGLNNLQTCLPNTDGRAYDAGCFMRYSETPFFADNQAIDITNYLNQGGSSNKWAIIGGVVGGVGLVAILLAILAWRQYRKPKRAPRGNILGATELKGPVNYKYSDLKAATKNFSEENKLGEGGFGDVYKGTLKNGNVVAVKKLVLGKSSKIDNDFESEVKLISNVHHRNLVRLLGCCSKKQERILVYEYMANSSLDKFLFGDRQGSLNWKQRRGIILGTARGLAYLHEEFHISIIHRDIKTSNILLDDNLHPKIADFGLARLLPGDRSHLSTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEVKKDDDGEYLLQKSWKLHERGMHLELMDKALDPNDYDGEEVKKMIEIALLCTQASAGMRPTMSEVVVLLQTRSLVEHLQPTMPVFVDTNLRSREGHSTSTGSSTSNATASFSILSAR* | 648 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g3320 | 647 | Pfam | Salt stress response/antifungal | 150 | 243 | IPR002902 | - | |
Psa5g3320 | 647 | Pfam | Salt stress response/antifungal | 42 | 131 | IPR002902 | - | |
Psa5g3320 | 647 | ProSiteProfiles | Gnk2-homologous domain profile. | 140 | 246 | IPR002902 | - | |
Psa5g3320 | 647 | ProSitePatterns | Protein kinases ATP-binding region signature. | 334 | 357 | IPR017441 | GO:0005524 | |
Psa5g3320 | 647 | Gene3D | Transferase(Phosphotransferase) domain 1 | 405 | 610 | - | - | |
Psa5g3320 | 647 | Gene3D | Phosphorylase Kinase; domain 1 | 297 | 404 | - | - | |
Psa5g3320 | 647 | Gene3D | - | 144 | 246 | IPR038408 | - | |
Psa5g3320 | 647 | Gene3D | - | 30 | 134 | IPR038408 | - | |
Psa5g3320 | 647 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 22 | 644 | - | - | |
Psa5g3320 | 647 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 616 | IPR011009 | - | |
Psa5g3320 | 647 | Pfam | Protein kinase domain | 329 | 595 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g3320 | 647 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 449 | 461 | IPR008271 | GO:0004672|GO:0006468 | |
Psa5g3320 | 647 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 22 | 644 | - | - | |
Psa5g3320 | 647 | CDD | STKc_IRAK | 334 | 600 | - | - | |
Psa5g3320 | 647 | SMART | serkin_6 | 328 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g3320 | 647 | ProSiteProfiles | Protein kinase domain profile. | 328 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa5g3320 | 647 | ProSiteProfiles | Gnk2-homologous domain profile. | 31 | 134 | IPR002902 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g3320 | Psa-Chr5 | 260492130 | 260499754 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g3320 | 5 | 647 | Receptor kinase-like Gene Family | AT1G70520 | 36.611 | 7.28e-129 | 392 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Psa5g3320 | Pkinase | 8.3e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g3320 | - | - | gmx:100801131 | 898.271 |