Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3286 ATGGCTCAATGTGTCAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGTTAAGATTGTTGCTAGTTATAACCAATATCGTGGGCATTGCGGGAAAAGTTAGGGGACAGTTAAAATGTCGATGGCATAGAATAAATGGCAGGTTCAAAAATTTGTTGGGTGTTACAAAATTGCTCTTAAAGGAAAGAAAAGTGGGACATCCGAGACCGATGTCATGGCAGATGCACATGCATTTTTTGCTCAGGATCAAGGTAGCACCATTCAATCTTGAGTATGCATGGCGATTGTTAAAAGATGAAGCTAAATGGCGCATCGTCGAAGAATCGATTGGAAGTTCTGCAAAAATAACAAAGACTTATGCTAGTGGGGCATCATCAGAGAACCCAGATACAACTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAACGTCCAATGGGACAAAAAGCCGCAAAAAGGAAGGGTAAGGCATTAGAAATTCCAAATGCAACACAAGATGCAAAGAATAAAAGAGCAATAACAATGGACAGACTTGCGCAAGCTAAGGAGGACGAGCTAGAATTAAGGGTAGTGCATATGATGATGAAAGACACTTCTACTATGAACGATAGTCAACGAGATATTCATGAAAAATATTGTTCAAACAATGACATTAATGTGCTAAACCAATCCTACGTGTTTAACGATATTTTGGAAGGACGTGCTCCCAATGTGCAATATACAATCAATGGGACACCATATAATATGGGGTATTATTTAGCAGATGGTATATATCCCGAGTGGGCTACACGACTTTTCAATGCCACAGGGAGAAAAGAAAAAATATTGCTCAACATCAAGATCAGCTAG 861 0.3926 MAQCVKDPIVGVDQKAESFWLRLLLVITNIVGIAGKVRGQLKCRWHRINGRFKNLLGVTKLLLKERKVGHPRPMSWQMHMHFLLRIKVAPFNLEYAWRLLKDEAKWRIVEESIGSSAKITKTYASGASSENPDTTSSYEFNSSSPMERPMGQKAAKRKGKALEIPNATQDAKNKRAITMDRLAQAKEDELELRVVHMMMKDTSTMNDSQRDIHEKYCSNNDINVLNQSYVFNDILEGRAPNVQYTINGTPYNMGYYLADGIYPEWATRLFNATGRKEKILLNIKIS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3286 286 Pfam No apical meristem-associated C-terminal domain 90 210 IPR029466 -
Psa5g3286 286 Pfam Plant transposon protein 217 268 IPR006912 -
Psa5g3286 286 MobiDBLite consensus disorder prediction 122 148 - -
Psa5g3286 286 PANTHER OS07G0575233 PROTEIN 6 214 - -
Psa5g3286 286 PANTHER - 6 214 - -
Psa5g3286 286 MobiDBLite consensus disorder prediction 122 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3286 Psa-Chr5 256789407 256791484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3286 9 162 Glutathione S-transferase Gene Family AT5G41240 27.607 1.77e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3286 - - cam:101493921 182.185