Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3247 ATGGAGTTTCATGGCTTGGTTTTGCTATTATGCTATGTTTGGTATGTTGTTTATTTGGGGTTTTGCAGTGGTCAGTTACAATCCTCTCAGACTCAAGTTCTTCTACAGTTACAAAAGCACTTGGAATTTCCAACACAGTTAGAAATATGGAAAGATCATAGGGAAGAAATTTGCTTTATTTCTTCTACACAAGTCAAAATCACATGCAAGGACAATTTTGTCACAGAGTTAAGTATCTTTGGTGATAAGCCAAATAATGGTAGAGATTTTGATGGATTTGCTATTCCAAATCAAACACTGACACAAACATTCTCATTGGACTCATTTGTAGCCACTCTTGCAAGGCTAACTAGCTTGAAAGTTCTTCATCTTGTTTCTTTAGGAATTTGGGGTCCACTTCCTGATAGAATTCATAGAATTTCTTCACTTGAGTATTTGGATTTGAGTTCGAATTTTCTTTACGGATCAATCCCGCCGAAAATCTCTACTATGTTCAACCTTCAAACTCTTATTTTGAGTGATAACTTCTTCAATGGCACTGTCCCTAACTCGTTCAATTCGTCGAATGTTCTCGCGGTTCTTAGTTTGAAGCATAATAAGTTGACGGGTCCATTTCCATTTTCGATCCTTAGTATCAAAACTTTGACTAACATTGATATGTCGAGAAATCGGATATCAGGAAGCTTGCGAGATTTTACTGATATGAGTAGCTTGGAAGAACTAGATTTAAGAGAAAATGAATTAGATTCTTCGTTACCTGAAATGCCGAAAGGGTTGATAATGCTTTTCCTCAACCGGAACTCGTTTTCAGGTCAAATTCCGAAACAATATGGCCAACTAAATAGTCTTCAGCAGCTAGATATTTCCTTCAATGCACTAACAGGAACTACTCCTTCTGAACTTTTTTCTTTGCCGAAAATTAGTTACTTGAATTTGGGATCCAACATGTTGAATGGAACACTTCAAAATCAGATGAAATGTGGCCAAAATCTTAGTTTTGTTGATATATCAAACAATAGGTTAGTTGGAGCTTTGCCTTCTTCTCTAAGAAATGAGTCAGAAAATCGGGTCGTTAAGAGTGATGGAAACTGTTTATCTGGAAGTTTGCAGCATCAGCATGAAGTATCTTACTGCAATGAAGCTCATGGAAAGACGAAGTCGTACCGATTTGGAGTTTTCGTTGGTGTCATTGTTGGAATTCTTGTTGTCATTGTGGTTTTGGGTTTATGCATTGTTGTTAGTTGTAAATGGTTGTACTCTAAGGGGATTTCAGAACAGCACCTATTGAATAAATCGGTTCAAGATAGCTACTCAGCCGGATTCTCATCCGAGCTTATTGCAAATGCAAGGTATGTTTCTGAAGCTGCAAAGTTAGGAAGAGAAGATCTTCCTTCGTGTCGATCGTATTCGTTGGAAGAGCTTATGAATGCGACGAATAACTTTGACAATTCTACTTTTCTCGGCGAAAATATATATGGGAAGTTGTACAAAGGAAAACTGGAGAGTGGGATACCTGTTGTAATAAGGTGTATACCTTTGTCGAAAAAGTACTCAATTCGGAATTTCAAACTGAGGCTGGATTTGCTTGCAAAGCTGCGTCACGCGCATTTGGTATCTCTTTTGGGACACTGCATTGATGGTATTTTAGGCGAGCGCAACGATTCAAAGGTCTTTCTTGTTTATGAATGCGTGTCAAATGGGAACTTTCAAACTTATCTGTCAGGTGATAGTTCTGGGAAGATTTTCAATTGGTCAGAGAGATTATCAGTTCTTATCAGTGTTGCTAAGGCTGTTCACTTCTTACACACTGGAATGATACCTGGTTTCTTCAAAAATAGACTTAAAACCAACAATGTTTTGCTTAATGAAAATTGTATGGCAAAGTTGAGTGACTATGGTTTGTCCATTATCTCAGAAGAAACTGATGCAACTGAGGTAAAAGGAGAAAGCCCAAATTCATGGCAAATGAAAAAGTTAGAGGATGATATTTATAGCTTTGGGTTCATAGTACTTGAGGCACTTGTTGGATCTTCAATTTCAGCTAAAAGAGAAGCAACTCTGCTAAGTGCAATGGCTTCCTTCAATAACCAAGATGACTGGAAACAAATAGTGGATCCAGTTGTGCAAGCTACTTGCTGCAAAGAATCTCTATCTACTGTGATTTCTATAACTAACAAATGTATTTCTACCGAACCGTGGAGTCGACCGTCCATCGAGGATGTTCTTTGGAACTTGCAGTATGCTACTCAAGTCCAAACAACAGCTGATAGTGATCACAGAATTTGA 2286 0.3788 MEFHGLVLLLCYVWYVVYLGFCSGQLQSSQTQVLLQLQKHLEFPTQLEIWKDHREEICFISSTQVKITCKDNFVTELSIFGDKPNNGRDFDGFAIPNQTLTQTFSLDSFVATLARLTSLKVLHLVSLGIWGPLPDRIHRISSLEYLDLSSNFLYGSIPPKISTMFNLQTLILSDNFFNGTVPNSFNSSNVLAVLSLKHNKLTGPFPFSILSIKTLTNIDMSRNRISGSLRDFTDMSSLEELDLRENELDSSLPEMPKGLIMLFLNRNSFSGQIPKQYGQLNSLQQLDISFNALTGTTPSELFSLPKISYLNLGSNMLNGTLQNQMKCGQNLSFVDISNNRLVGALPSSLRNESENRVVKSDGNCLSGSLQHQHEVSYCNEAHGKTKSYRFGVFVGVIVGILVVIVVLGLCIVVSCKWLYSKGISEQHLLNKSVQDSYSAGFSSELIANARYVSEAAKLGREDLPSCRSYSLEELMNATNNFDNSTFLGENIYGKLYKGKLESGIPVVIRCIPLSKKYSIRNFKLRLDLLAKLRHAHLVSLLGHCIDGILGERNDSKVFLVYECVSNGNFQTYLSGDSSGKIFNWSERLSVLISVAKAVHFLHTGMIPGFFKNRLKTNNVLLNENCMAKLSDYGLSIISEETDATEVKGESPNSWQMKKLEDDIYSFGFIVLEALVGSSISAKREATLLSAMASFNNQDDWKQIVDPVVQATCCKESLSTVISITNKCISTEPWSRPSIEDVLWNLQYATQVQTTADSDHRI* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3247 761 ProSiteProfiles Protein kinase domain profile. 481 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3247 761 Gene3D Ribonuclease Inhibitor 260 389 IPR032675 -
Psa5g3247 761 Gene3D Transferase(Phosphotransferase) domain 1 564 760 - -
Psa5g3247 761 PANTHER BNAA09G06560D PROTEIN 6 759 - -
Psa5g3247 761 SUPERFAMILY L domain-like 113 370 - -
Psa5g3247 761 Pfam Protein tyrosine and serine/threonine kinase 486 742 IPR001245 GO:0004672|GO:0006468
Psa5g3247 761 PANTHER OS07G0166700 PROTEIN 6 759 IPR045272 GO:0004714|GO:0006468
Psa5g3247 761 SUPERFAMILY Protein kinase-like (PK-like) 464 746 IPR011009 -
Psa5g3247 761 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Psa5g3247 761 Gene3D Phosphorylase Kinase; domain 1 446 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3247 Psa-Chr5 254731383 254735750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3247 7 693 Miscellaneous Gene Families AT5G14210 49.857 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Psa5g3247 PK_Tyr_Ser-Thr 3.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3247 - - gmx:100802978 1100.89