Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3207 ATGATTAGAGTTTGGCTTGTGTTGATGCCTCTCTCTAATTTGTTGTTCTCTTCTACCGCGGTTAGCTTGGAGAATTCGATAGTACCGGAGTTTATAAATATTGGGGTTCTCTACTCTTTCAATACTAGTGTTGGTAGAATAGTGAAAATTGTGGTGGAAACTGCGGTTGATGATATAAATTCTGATTCTACTATTCTTGGTAAAACTAAGTTGAAGCTCTCATTTCAAGAAGATTCAAAATACAGAGGCTTTTTGAGCATTGCTGAAGCGTTGCAGCTCATGGCGACACACACTGTGGCCATTATCGATCCGCAGACATCTACGACCGCTCATGTCATATCTCATATAGCAAATGAGCTTCATGTTCCTCTGTTATCGTTTTCAGCCACTGATCCTACTCTTTCCTCGCTTCAATTCCCGTTCTTCATTAGAACTGCTTTCAATGACATTTTTCAAATGACTGCAATAGCAGACATAGTTAGCCACTACGTTTGGAGAGAGGTTATCGTGGTCTACGGGGATGACGACCATGGGAGGAACGGAATTGGTGCGTTAGCGGATAAGCTTGCTGAGAGACGTTGCAAGATATCGTTTAAAGCACCGATGACTCCTGATGCAAAGAGGGAGGAGATTACTGACATTCTTGTTCAGGTGGCTTTGGCAGAATCTCGGGTTATAGTTCTTCACACAAGTACTTCTTGGGGTCCAAAAGTCTTGAGTGTTGCAAAGTCTCTTGGAATGATGCAAAACG 751 0.4234 MIRVWLVLMPLSNLLFSSTAVSLENSIVPEFINIGVLYSFNTSVGRIVKIVVETAVDDINSDSTILGKTKLKLSFQEDSKYRGFLSIAEALQLMATHTVAIIDPQTSTTAHVISHIANELHVPLLSFSATDPTLSSLQFPFFIRTAFNDIFQMTAIADIVSHYVWREVIVVYGDDDHGRNGIGALADKLAERRCKISFKAPMTPDAKREEITDILVQVALAESRVIVLHTSTSWGPKVLSVAKSLGMMQN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3207 250 Pfam Receptor family ligand binding region 51 249 IPR001828 -
Psa5g3207 250 Gene3D - 50 147 - -
Psa5g3207 250 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 250 - -
Psa5g3207 250 SUPERFAMILY Periplasmic binding protein-like I 30 248 IPR028082 -
Psa5g3207 250 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa5g3207 250 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa5g3207 250 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa5g3207 250 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016021
Psa5g3207 250 PANTHER GLUTAMATE RECEPTOR 11 250 - -
Psa5g3207 250 Gene3D - 148 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3207 Psa-Chr5 250000754 250001504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3207 5 248 Ion Channels AT3G51480 53.012 2.66e-90 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3207 K05387 - gmx:100788917 390.963