LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g3193	ATGTCTCCAATGGATTCTCCAACTCATAAAGATACCGAAAGAAACCAGATATCGCCTTTAGACGATGAAGCATCACCAAATGCATACAAAGTTGCAATTCCTCCAAAACAGAACTTGTTCAAGGAATTTCAATACACAGTTAAAGAGACATTCTTTGCTGATGATCCTCTAAGATCCTTCAAAGACCAAACTAAGTCAAAAAAGTTTATCCTTTGTATTGAGGCCATTTTTCCAATAATTAATTGGGGGAGAGGCTATAATCTTAAGAAGTTTAGGGGAGATATAATTGCTGGTCTCACTATTGCAAGTCTTTGCATACCTCAGGATATTGGATACTCGAAGCTTGCGCATTTGGCTCCGCAGTATGGACTGTACTCGAGCTTTGTTCCGCCGCTGATTTATGCATTCATGGGGAGTTCTCGCGATATAGCAATAGGACCGGTGGCTGTGGTTTCTCTCTTGATGGGGACTTTACTTAGTAACGAGATTGATCCGGTTACTCATAAAGAAGAATATCAAAGACTTGCTTTTACAGCCACATTTTTTGCTGGGATTACACAAGCAACTCTTGGGATTTTCAGGTTAGGATTCTTGATTGATTTCCTATCCCATGCTGCTATTGTTGGTTTTATGGGAGGTGCTGCCATCACAATTGGCCTTCAACAGCTAAAGGGTTTCCTTGGCATTAAAAGCAAAATGTTCACAACAAAAACCGATATCGTCTCCGTGCTGCATTCAGTGTTCGCATCAGCCAAACATGGATGGAACTGGCACACTATATTAATCGGAGCTAGCTTTTTGTGTTTTCTTCTCGTCGCCAAGTATATCGGGAAGAAGAACAATAAGTTCTTCTGGGTTCCAGCAATTGCTCCATTGATATCCGTCGTGTTGTCCACTTTCTTCGTATTCATAACACGCGCAGATAAACAAGGCGTAGAAATTGTAAATCATATAGAGAAAGGGATCAATCCTTCATCTGTTCATGATATTTATTTTAGCGGCGAATACCTTGGGAAAGGTTTTAAAATCGGTGTCACGGCAGGCATGATAGCACTGACAGAAGCCATAGCTATTGGAAGAACTTTTGCATCAATGAAGGACTATCAACTCGATGGAAACAGAGAAATGGTTGCATTAGGAACAATGAACGTTGTTGGTTCGATGACTTCATGTTATGTGGCAACCGGTTCTTTCTCTCGGTCGGCGGTAAATTACATGGCTGGCTGTCAAACTGCGGTATCTAATATTGTGATGTCCGTGGTTGTTTTTCTAACGCTGCAATTCCTAACTCCTCTTTTTAAGTACACTCCAAATGCAATTCTTGCTGCCATCATCATTTCTGCTGTCATCAGCCTTGTGGACTATCAGGCAGCAATTTTGATTTGGAAGATCGATAAATTCGATTTCATTGCTTGCATGGGAGCATTCTTCGGAGTTGTTTTCATCTCGGTTGAGATAGGACTTCTAATTGCTGTTTCTATATCTTTTGCGAAAATCCTATTACAAGTAACAAGGCCAAGAACTGCTATTTTGGGGAAGATACCTCGGACAACTGTGTATAGAAACATCGAACAATATCCAGAAGCTAGTAAGATTCCAGGTGTAATGATTGTAAGAGTTGATTCTGCAATATATTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGTTAACGGATGAAGAAGCTGTGAAAGGAGACTACCACACAAGAATTCAGTTTTTGATAGTTGAAATGTCACCTGTTACTGATATTGATACAAGTGGCATCCAAGCCTTTGAAGAGTTACATAGAAGTCTTGAAAAAAGAAGTGTTCAACTTGTTCTGGCAAATCCTGGTTCAGCAGTGACAGACAAACTTTACACATCCAATTTTGCTAACATAATTGGGCAGGACAAGATTTTCCTCACTGTTGCAGAAGCTGTTGCATATTGTTCTCCAAAGCTGGATGTGAACCCCTGA	1968	0.4014	MSPMDSPTHKDTERNQISPLDDEASPNAYKVAIPPKQNLFKEFQYTVKETFFADDPLRSFKDQTKSKKFILCIEAIFPIINWGRGYNLKKFRGDIIAGLTIASLCIPQDIGYSKLAHLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLMGTLLSNEIDPVTHKEEYQRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIGLQQLKGFLGIKSKMFTTKTDIVSVLHSVFASAKHGWNWHTILIGASFLCFLLVAKYIGKKNNKFFWVPAIAPLISVVLSTFFVFITRADKQGVEIVNHIEKGINPSSVHDIYFSGEYLGKGFKIGVTAGMIALTEAIAIGRTFASMKDYQLDGNREMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVFLTLQFLTPLFKYTPNAILAAIIISAVISLVDYQAAILIWKIDKFDFIACMGAFFGVVFISVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIEQYPEASKIPGVMIVRVDSAIYFSNSNYVKERILRWLTDEEAVKGDYHTRIQFLIVEMSPVTDIDTSGIQAFEELHRSLEKRSVQLVLANPGSAVTDKLYTSNFANIIGQDKIFLTVAEAVAYCSPKLDVNP*	656

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g3193	655	Pfam	Sulfate permease family	91	473	IPR011547	GO:0016021
	Psa5g3193	655	PANTHER	SULFATE TRANSPORTER	21	655	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
	Psa5g3193	655	TIGRFAM	sulP: sulfate permease	78	643	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
	Psa5g3193	655	Pfam	STAS domain	526	643	IPR002645	-
	Psa5g3193	655	ProSiteProfiles	STAS domain profile.	525	647	IPR002645	-
	Psa5g3193	655	PANTHER	HIGH AFFINITY SULFATE TRANSPORTER TYPE 1	21	655	-	-
	Psa5g3193	655	CDD	STAS_SulP_like_sulfate_transporter	526	640	-	-
	Psa5g3193	655	SUPERFAMILY	SpoIIaa-like	527	648	IPR036513	-
	Psa5g3193	655	MobiDBLite	consensus disorder prediction	1	23	-	-
	Psa5g3193	655	ProSitePatterns	SLC26A transporters signature.	120	141	IPR018045	GO:0008271\|GO:0008272
	Psa5g3193	655	Gene3D	STAS domain	505	650	IPR036513	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g3193	Psa-Chr5	248619924	248625606	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g3193	4	651	Inorganic Solute Cotransporters	AT1G22150	74.465	0.0	969

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g3193	K17470		-	gmx:100804208	1085.48