Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3152 ATGCATCAGATTTTCCATAACAACCTAACCAACGCTATGGATTCCAAGAAGCTTCGAAGAAAACCTAAACTCGAGCGTCGTAATGCTCTCAAGTACTTCGATTACGACGCGGGATCATCTTCCTCTTTCTCTTCCTCGGATGATTCATCTGGTTCACTATATACTCGTTCAATGGAGTTATATGATCGTACTAGCTTCCGTATTGAAGGGGTTGAAGGTGAGCTCGATCGGATTTGCAGGAGTTTGGGACTTTCTGGACCGGAGGATTTTGCTATTCCGGCGGCTGCATGGGAGGCTATGAAGATTCGGTACTCTTCGGATAGTCTTCCGAGTTTGAAGCTTGAAGAGGTTGATTTTCAGGAGAAGGTAAATGAGGTGAGAGAATCAGAGGAGGAGGAAGGTAAATTGGATGTGAAATACGAAGATACGGATACAGATAGGGGTAGGGTTACGGATGAGGTTGCTGAGACTGTTGTTGTTGCTGCTAGTGATGGTGGTGGTGGTTGGGGTATCAATGGAATTCATCCACCTATGATTAAGGCACCGGAATTGGCTCCGGTAAGGGAAGGGGAAGAAGGGGTTTTGAACGGGGAAGTGGTGGAGAAAGAAGGTGAGGAAGTTGGTATTAATAGGGTGAGTTTGAAGAGAGAAGAGGAAGAGGGGGTGGTGGATAATATGGATATGATTGTTGAGATTGTTGTTGGCCTTTCAGAGTCATCTTTGTTTAGTACTACTTCCAACGAAGATGATTTATCTAACACTGTCGTGGAACCTTGGTCCAATAATTTGTCTCCTAATGGGAGAATTAAGCGTATTATTACCCCTGGATGCTGGCAAAAGGGTCATTTTTTGGGTGGTGGTTCGTTTGGATCTGTCTATGAAGGAATTTCTGACGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCATTGCTTGATCAAGGGGATCAGGGAAAACAAAGTGTCTATCAGCTGGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGATAATATAGTTCAATACTATGGCACTGAAATGGATGAATCCAAGCTTCATATCTTTATTGAGCTTGTAACCAAAGGTTCTCTTAGAAGCCTCTATCAGAGGTATACTCTCCGAGATTCCCAAGTATCTGCCTATACAAGACAGATTCTGCATGGTTTGAAGTATCTTCACGATCAAAATGTGGTTCACAGGGATATCAAATGTGCAAATATATTGGTGCATGCAAGTGGATCTGTCAAACTTGCAGATTTTGGGTTAGCAAAGGCAACCAAGTTGAATGATGTTAAATCATGCAAGGGGACAGCATTCTGGATGGCCCCTGAGGTTGTGAAAGGAAAGAACAAAGGTTATGGGCTTCCAGCTGATATTTGGAGTCTGGGATGCACTGTGCTAGAGATGCTAACGGGACAAATTCCATACTCCAATTTGGAATGTATGCAGGCAATATTTAGAATTGGAAAAGGTGTGCTACCTCCTATTCCTGATACTCTTTCAAGAGATGCAAAAGATTTTATCATGCAGTGCCTTCAAGTTAATCCCGATGGTCGCCCTACTGCTGCTCAACTCTTAAACCATCCGTTTCTCCAAAGGCCACTTTCACAGTCTTCATCTCCTTACATTCATGGCAGAAGGGGTTAA 1647 0.4299 MHQIFHNNLTNAMDSKKLRRKPKLERRNALKYFDYDAGSSSSFSSSDDSSGSLYTRSMELYDRTSFRIEGVEGELDRICRSLGLSGPEDFAIPAAAWEAMKIRYSSDSLPSLKLEEVDFQEKVNEVRESEEEEGKLDVKYEDTDTDRGRVTDEVAETVVVAASDGGGGWGINGIHPPMIKAPELAPVREGEEGVLNGEVVEKEGEEVGINRVSLKREEEEGVVDNMDMIVEIVVGLSESSLFSTTSNEDDLSNTVVEPWSNNLSPNGRIKRIITPGCWQKGHFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGDQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDESKLHIFIELVTKGSLRSLYQRYTLRDSQVSAYTRQILHGLKYLHDQNVVHRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADIWSLGCTVLEMLTGQIPYSNLECMQAIFRIGKGVLPPIPDTLSRDAKDFIMQCLQVNPDGRPTAAQLLNHPFLQRPLSQSSSPYIHGRRG* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3152 548 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 61 543 - -
Psa5g3152 548 Pfam Protein kinase domain 279 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3152 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Psa5g3152 548 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 543 - -
Psa5g3152 548 Coils Coil 112 132 - -
Psa5g3152 548 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Psa5g3152 548 SMART serkin_6 278 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3152 548 ProSiteProfiles Protein kinase domain profile. 278 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3152 548 SUPERFAMILY Protein kinase-like (PK-like) 259 536 IPR011009 -
Psa5g3152 548 Gene3D Transferase(Phosphotransferase) domain 1 278 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3152 Psa-Chr5 245055544 245066274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3152 232 535 MAP Kinase Kinase Kinase AT4G08500 66.230 8.34e-135 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa5g3152 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3152 K13414 - gmx:100819999 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3152 5 245055544 245066274 Psa5g3152 5 245055544 245066274 ECH