Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3151 ATGGAAAGTGTGGACAACAATAGAATAAATTTGGATTTGAGTTTGAATATTGAATATTCAGTAGAAGATGTTTCTTCAAAAAATGGTTCTTCTGAAATTATTATTGATCGTAATATTATAGACGAAGTTGAAGAAATTGGAATTTCTGAGAAAGAAAATATTTTGATTTCTAGTCAAAATATTGAGATAAATGGATTTTTACAAGAAAGTAGTGAGGGTGACACTTTTAAAGAGTCAAATATTATTCCTTTTGTTGGTCAAATTTTTCTTAGTGAGGAAGAAGCATTTATATTTTATAAGAGATATGTATATCAACACGGGTTCTCAGTTCGAAAAGGTAGATTCATCAAACAAAATGGAATTGTGAGTAGGCGTGATTTCTTTTGCCATCGTGAAGGTAGAACTTCCTTGAAAATCATTGAACCATCGAAAGAACAAAGAAATAGAGAATCAACTAGGTGTGAATGTAAAGCTCATTTGCGAATTTCTTTGCAAAAAACTCATGATATGTTTCCAACTAATCGAATTATCTCAGATGATTATTCTGAACGAATTTTCTTGTTAAAGGAAGGTGGACTTTCAGTTAGACAGTTAATGTGTGTCATAGAGCTAGAAAAAAATGTGGACCATGGTTATCTTCCATTTATTGAAAAGGATGTTCGTAATCTGTTTTTGAAAGCCAAGAAAAAAGTTGAAATAACTGATGTTGTTGATCTTCTTAAGTATTGTGAGGATGCAAAAAAGAGTTGCTCTAAATTTCAGTATGCATATACACTTGACGAAGAAAGAAGGCTAGAGCATATATTTTGGTCTCATGCTTATCGTTTTGATTGGTACCAAGAATATGGGGATGTTGTTGTGTTTGATGCTACATACAAGGTAAATTCTTATGAAATGCCATTTGGAATTTTTGTGGCAATCAATGATATTAAGCAAAAAGAAGAGCATGAAGCTATGTTAGAAAAATGCAAAAGATTGAACATGAAGTTGATATCACCTTTGCAAGAGCAAGCTCATAGTCTTCTCATAGGTTTTGCTTTTCAAAAGTTTCAAGAGGAGTTTGAAAGGTCTATCCAATATTCAATTCATCATCAAAATGATAATGTTTTTGTGTTGCGGTATTATAAAGATGCTAATAGTAGAAAACACATGGTCTTTTGGGATGGTAAAATAGCTACATGTAGTTGTAAGCACTTTGAGTTTTGGGGATATTATGTCAACACATTCTCAGTATTTTTCTTCGTAAAGATTGTCATGAAATTCCTTCTAATTATTTGCCATCGGCGACTTCAAGTATCACATGAGGATGAGGAAGTAAATCCTCAACCAATCAATGTTGTGTTTGAGGACCAAATAATATGTTACAACAATGAAGCTCATGCGAATGATATTGTTCAATATCCTCCGATTTCCAAAACAAAAGGTCGTCCTAAAAGAAGACGTCTTAAAGGTGGAAAAGAGCTTTCACATACCATGAATACTTGTGGATTATGCAAAGACATAGGACATAATATTGCAACATGTCCTCAAAAAGAAAATATTCAATTTTCTGCTCATACTAAAAACAAGAAGCAGAAAATATGTCAAGATGCAAATTTAAATTCGGTTCTTCTACCAAAAATTTAG 1626 0.321 MESVDNNRINLDLSLNIEYSVEDVSSKNGSSEIIIDRNIIDEVEEIGISEKENILISSQNIEINGFLQESSEGDTFKESNIIPFVGQIFLSEEEAFIFYKRYVYQHGFSVRKGRFIKQNGIVSRRDFFCHREGRTSLKIIEPSKEQRNRESTRCECKAHLRISLQKTHDMFPTNRIISDDYSERIFLLKEGGLSVRQLMCVIELEKNVDHGYLPFIEKDVRNLFLKAKKKVEITDVVDLLKYCEDAKKSCSKFQYAYTLDEERRLEHIFWSHAYRFDWYQEYGDVVVFDATYKVNSYEMPFGIFVAINDIKQKEEHEAMLEKCKRLNMKLISPLQEQAHSLLIGFAFQKFQEEFERSIQYSIHHQNDNVFVLRYYKDANSRKHMVFWDGKIATCSCKHFEFWGYYVNTFSVFFFVKIVMKFLLIICHRRLQVSHEDEEVNPQPINVVFEDQIICYNNEAHANDIVQYPPISKTKGRPKRRRLKGGKELSHTMNTCGLCKDIGHNIATCPQKENIQFSAHTKNKKQKICQDANLNSVLLPKI* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3151 541 Pfam FAR1 DNA-binding domain 98 167 IPR004330 -
Psa5g3151 541 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 376 IPR031052 GO:0006355
Psa5g3151 541 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 48 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3151 Psa-Chr5 245051401 245053806 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa5g3151 FAR1 2.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3151 - - mtr:MTR_4g035820 448.358