Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3129 ATGTCTACTTGCATTGAAAATCGTCCAACCAACACTACCCTTGAATACTGCGTCGCTAAACACCACAACTCCATCACCCCATTGCTGTCAAATTCTTCAAACAAAAACAAAGATGAAGATGATAAGTATTTAAACATGATTATAAAGGGAAGATCCGAAATAGAACCCTCAGTGCTAGACCCTCGTGATGAAGGAACTTCAGATCACTGGATTCATAGAAACACTTCCTTGATCCGTCTCACTGGCAAACACCCTTTCAACTCAGAGCCACCACTCCAAACGCTCATGCACCACGGCTTCATAACACCGGTTCCGCTCCACTATGTCCGCAACCACGGGCCCGTTCCCAAAGCCCGTTGGGCCGACTGGACCATCGAAGTAACAGGCCTAGTAAAAAACCCAGCCAACTTCACAATGGACCAACTGGTCAACGATTTCCCAAGCCGCGAATTCCCTGTGACACTCGTTTGTTCCGCGAACCGTCGCAAGGAACAAAACATGGTGAAACAAACTATTGGCTTTAACTGGGGCCCCTCTGCTACCTCCACTTCGGTGTGGCGCGGTGTACCGTTGAGAACCATCCTCAAGCGTTGTGGAATCTATAACCGCAACAGTGGGGAGCTCTATGTTTGCTTTGAAGGCGCTGAGGAATTGCCGGGTGGCGGTGGGTGTAAATATGGAACTAGTATCTTGTGCGAGGTTGCACTGGATCGTACCCGTGATATCATTCTCGCGTATATGCAAAACGGCGACGTTTTGCTTCCTGATCATGGGTTTCCTGTACGTGTTATCGTGCCTGGTTTCACTGCAGGGAGAATGGTGAAATGGTTGAAGCGCATCGTTGTAACAACCAAAGAATCTGATAGCTATTATCATTACCATGATAACCGATTACTTCCCTCTCACGTTGACGCCGAGCTTGCCAATACAGAAGCGTGGTTCTATAAACCGGAGTATATTATAAACGAGTTGAACATAAACTCAGTGATAACAACGCCGTATCACGGTGAGATATTGGCGGTTAACTCAGACACTACTCAGATGCCTTATTTACTTAGAGGCTACGCATATTCCGGTGGTGGGAGAAAGGTGACACGAGTTGAGGTGACGATGGACGGTGGTGAAACGTGGAAAGTATGCCGATTGGAGCATCCAGAGAAACCAAACAAACATGGTAAGTATTGGTGTTGGTGTTTTTGGTCGTTGGAGGTTGAAGTGTTGGAGTTCTTTGGAGGGAAAGAGATTGCTGTGCGTGCATGGGATCTGGCTAACAACACCCAGCCGGAGAATCTCAATTGGAATCTTATGGGCATGATGAACAACTGCTGGTTTAAAGTCAAAACAAACATGTACAAGCCTGAGAATAAGGGAGAAATATTTGGGATAATGTTTGAGCACCCAACCCAACCAGGAAACCAATCTGGTGGTTGGATGGTCAAAGAAAAAGAACAAGCATTTCAGAAATCATCAAACTCTGACCCAACCAAGAAGATCAATGTTTCCTCATCACTGAACACAAACAGTACTAGCACTACTAGCTCAAAAATGTTCACTATCTCTGAGGTGAAAAAACATAATAACTCTGATTCAGCTTGGATCATCATAGATGGTCACGTTTATGATTGCACTCACTACCTCAAAGACCACCCCGGAGGTGCCGATAGCATCCTCATCAACGCCGGCACTGATTGTACAGAAGAGTTTCAAGCCATCCATTCTGATAAAGCAAAGAAAATGCTTGACGATTACTTAATCGGCGAGCTCGTAACCACGGACGGAAATGGCACCAGCGAAGTTATTGTTACACAAATTCCTACTAATGTGGCTTTAACAAACCCGCGTGAGAAAATTCCATGCAAGCTTGTGTCAAAAACATCAATCTCCCACAATGTTAGGATCTTCCGGTTTGCTTTACCTTATGAGGACCAACCATTGGGTTTACCAGTTGGGAAGCACTTATTTTTATGTGACACTATTGAAGATAAGTTATGCATGCGAGCTTTCACTCCTACCAGCTGTGTAGATGAAAAGGGATATTTTGATCTATTGGTTAAGATATATTTCAAAGGAGTGCATCCAAAGTTTCCAAATGGTGGCATTATGTCTCAACATTTGGATTCATTGCCTATTGGTTCAGTTTTGGATATAAAGGGTCCATTGGGACATATTGAGTATACTGGTAAAGGAAATTTTCTTGTTCGTGGAAAACATAAGTTTGCAAAGAAGTTAGCAATGTTGGCAGGTGGAACTGGGATAACACCGATTTACCAAGTGGTTCAAGCGATTATAAAAGATCCAGAAGATCTCACTGAAATGCATGTTGTGTATGGTAACCAAAGTGAGGATGATATATTGCTAAGAGAAGAGTTGGATGCTTGGGCTGAGAAATATGAACGGTTCAAAGTGTGGTACGTGGTACAAGAAAGTAAAACAGAAGATTGGGAGTATAGTGTAGGGTTCATCACGGAAAGTATATTGAAGAAGCATGTTCCGGAGGCATCAGAGGATACAGTGGCATTGGCATGTGGACCACCACCCATGATTCATGGGGTGCAATCACATTTGGAAAAATTGGGCTATGATATCAAGAACAACTTGCTTGTGTTTTAG 2610 0.4391 MSTCIENRPTNTTLEYCVAKHHNSITPLLSNSSNKNKDEDDKYLNMIIKGRSEIEPSVLDPRDEGTSDHWIHRNTSLIRLTGKHPFNSEPPLQTLMHHGFITPVPLHYVRNHGPVPKARWADWTIEVTGLVKNPANFTMDQLVNDFPSREFPVTLVCSANRRKEQNMVKQTIGFNWGPSATSTSVWRGVPLRTILKRCGIYNRNSGELYVCFEGAEELPGGGGCKYGTSILCEVALDRTRDIILAYMQNGDVLLPDHGFPVRVIVPGFTAGRMVKWLKRIVVTTKESDSYYHYHDNRLLPSHVDAELANTEAWFYKPEYIINELNINSVITTPYHGEILAVNSDTTQMPYLLRGYAYSGGGRKVTRVEVTMDGGETWKVCRLEHPEKPNKHGKYWCWCFWSLEVEVLEFFGGKEIAVRAWDLANNTQPENLNWNLMGMMNNCWFKVKTNMYKPENKGEIFGIMFEHPTQPGNQSGGWMVKEKEQAFQKSSNSDPTKKINVSSSLNTNSTSTTSSKMFTISEVKKHNNSDSAWIIIDGHVYDCTHYLKDHPGGADSILINAGTDCTEEFQAIHSDKAKKMLDDYLIGELVTTDGNGTSEVIVTQIPTNVALTNPREKIPCKLVSKTSISHNVRIFRFALPYEDQPLGLPVGKHLFLCDTIEDKLCMRAFTPTSCVDEKGYFDLLVKIYFKGVHPKFPNGGIMSQHLDSLPIGSVLDIKGPLGHIEYTGKGNFLVRGKHKFAKKLAMLAGGTGITPIYQVVQAIIKDPEDLTEMHVVYGNQSEDDILLREELDAWAEKYERFKVWYVVQESKTEDWEYSVGFITESILKKHVPEASEDTVALACGPPPMIHGVQSHLEKLGYDIKNNLLVF* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3129 869 SUPERFAMILY E set domains 323 448 IPR014756 -
Psa5g3129 869 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 514 589 IPR001199 -
Psa5g3129 869 SUPERFAMILY Riboflavin synthase domain-like 609 727 IPR017938 -
Psa5g3129 869 PANTHER NADH-CYTOCHROME B5 REDUCTASE 40 869 IPR001834 GO:0016491
Psa5g3129 869 CDD cyt_b5_reduct_like 619 869 - -
Psa5g3129 869 Gene3D - 62 313 IPR036374 -
Psa5g3129 869 CDD eukary_NR_Moco 63 448 - -
Psa5g3129 869 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 129 164 IPR022407 GO:0043546
Psa5g3129 869 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 614 726 IPR017927 GO:0016491
Psa5g3129 869 PIRSF Nitr_rd_NADH 2 868 IPR012137 GO:0006809|GO:0042128|GO:0050464
Psa5g3129 869 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 61 321 IPR036374 -
Psa5g3129 869 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 545 552 IPR018506 GO:0020037
Psa5g3129 869 Pfam Mo-co oxidoreductase dimerisation domain 319 449 IPR005066 GO:0016491|GO:0030151
Psa5g3129 869 Gene3D - 721 869 IPR039261 -
Psa5g3129 869 MobiDBLite consensus disorder prediction 484 506 - -
Psa5g3129 869 Pfam Oxidoreductase NAD-binding domain 745 852 IPR001433 GO:0016491
Psa5g3129 869 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 548 558 IPR001709 GO:0016491
Psa5g3129 869 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 744 763 IPR001709 GO:0016491
Psa5g3129 869 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 770 779 IPR001709 GO:0016491
Psa5g3129 869 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 782 793 IPR001709 GO:0016491
Psa5g3129 869 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 814 830 IPR001709 GO:0016491
Psa5g3129 869 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 838 846 IPR001709 GO:0016491
Psa5g3129 869 Gene3D - 507 594 IPR036400 -
Psa5g3129 869 PANTHER NITRATE REDUCTASE 40 869 - -
Psa5g3129 869 Pfam Oxidoreductase molybdopterin binding domain 112 291 IPR000572 -
Psa5g3129 869 PRINTS Cytochrome B5 signature 539 549 IPR001199 -
Psa5g3129 869 PRINTS Cytochrome B5 signature 549 563 IPR001199 -
Psa5g3129 869 PRINTS Cytochrome B5 signature 564 571 IPR001199 -
Psa5g3129 869 PRINTS Cytochrome B5 signature 576 588 IPR001199 -
Psa5g3129 869 SMART Cyt_b5_2 517 589 IPR001199 -
Psa5g3129 869 PRINTS Cytochrome B5 reductase signature 645 656 - -
Psa5g3129 869 PRINTS Cytochrome B5 reductase signature 666 673 - -
Psa5g3129 869 PRINTS Cytochrome B5 reductase signature 711 725 - -
Psa5g3129 869 PRINTS Cytochrome B5 reductase signature 744 763 - -
Psa5g3129 869 PRINTS Cytochrome B5 reductase signature 782 793 - -
Psa5g3129 869 PRINTS Cytochrome B5 reductase signature 838 846 - -
Psa5g3129 869 Gene3D Translation factors 606 720 - -
Psa5g3129 869 Pfam Cytochrome b5-like Heme/Steroid binding domain 519 588 IPR001199 -
Psa5g3129 869 Gene3D - 323 501 - -
Psa5g3129 869 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 713 864 IPR039261 -
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 78 92 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 100 116 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 153 164 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 164 176 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 179 194 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 237 253 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 254 267 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 270 283 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 321 333 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 352 366 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 366 378 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 393 403 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 418 430 IPR008335 GO:0016491
Psa5g3129 869 PRINTS Eukaryotic molybdopterin domain signature 431 444 IPR008335 GO:0016491
Psa5g3129 869 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 512 591 IPR036400 -
Psa5g3129 869 Pfam Oxidoreductase FAD-binding domain 619 725 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3129 Psa-Chr5 244411808 244416241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3129 620 860 NADPH P450 reductases AT5G17770 37.705 4.47e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3129 K10534 - gmx:732634 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3129 5 244411808 244416241 Psa5g3129 5 244411808 244416241 ECH