Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3115 ATGAGCAAATCCAAACCTCAAAGAAAGCCTACTACTATTACTACTCATGTAAGCCAGAAAGAAAACCAAAAGCCTCAGAAAACTGAGAAACAACCCTCTTGGGCAGTTGTGAGAGGCTTTTTGGCTTGTAAGAATGTTGAAATCCAAAAACAGCAACAGCAGAAGGAAGCAAAACAGCAACCACAACCTCAACCACAACCTCAACATGTAGCAGAAACAAAACAACCTAAGAAGAAACAGGAACCGAGAAAGCTGAAAGAGGAAAGAGTCTCGGAAGACAACAACAAGAAATGCAAGAAAATGAAATGTTCAGGTTCACTGTGCAACAACACTGGAATGATGTCCAAGCCAGAAACAACAACAACAACAACCCCAACATCAGCAGCAGCAGCCACATCAACAACAAGAACAACTACAGATATTCACAAGAAAAAGGCATCACTTGGTGGCTCCAAAACCAACTTGGCTTCAAGTTCTAGCAGATCCATGAAAGCTCCTCTTAATGAACTTAACGGAAGAACCGCTTCAGCTTTGTCGTCTTCTTCGCAATCAGCAGCATCTTCTAACTCATCCGGCGCTGGTTCTTTTAGAGGAATGCCGTTTAGGAGACTCTCCGGTTGTTACGAGTGTCGAATGGTTGTTGACCCTGTCCTTGGTTTCACCAGAGACTCTTCTCTTAGAAGCTCCATTTGTTCTTGTCCTGATTGTGGTGAAGTCATGAAAACTGAAAGCCTTGAACATCATCAAGCTGTCAAACATGCAGTTTCTGAGCTGGGTCCAGAAGATACAAGCAAGAACATAGTGGAAATCATATTTCATTCAAGCTGGCTAAAGAAGCAATCTCCGGTCTGCAAAATCGACCGCATCCTTAAAGTCCACAACACACAGAAAACCATAACGAAATTCGAAGAGTACAGAGACTCAATCAAAGCGAAAGCAACCAATCTCTCGAAAAAACACCCCCGCTGCATAGCAGACGGAAACGAGTTACTAAGGTTTCACTGCACGACCTTTGTTTGTTCTTTAGGCCTAAACGGTTCCTCGAATCTCTGCAACTCAACACCGCAATGCAACGTCTGCAGCATAATAAAACACGGGTTTAAGTTGAGTAGTGGAGGGGAAGGGATATTGACGACAGCGACGAGTGGCAAAGCACACGACAAAGCCAGTAGTGTTTTAGATGTTTCAGGTTATGCGGGCAATGATGAGAAGAGAGCAATGTTAGTTTGTCGGGTGATAGCAGGGAGAGTGAAGAAGAACACGGAAGGTGGTAGTAATGGTATGGAAGAGTATGATTCGGTGAGTGCTGGTGACGTCGGTGCTTATTCAAATTTGGATGAGTTGTATGTCTACAACCCTCGAGCTATTTTGCCTTGCTTTGTTGTAATCTATAGAGGCTTTTAA 1404 0.4352 MSKSKPQRKPTTITTHVSQKENQKPQKTEKQPSWAVVRGFLACKNVEIQKQQQQKEAKQQPQPQPQPQHVAETKQPKKKQEPRKLKEERVSEDNNKKCKKMKCSGSLCNNTGMMSKPETTTTTTPTSAAAATSTTRTTTDIHKKKASLGGSKTNLASSSSRSMKAPLNELNGRTASALSSSSQSAASSNSSGAGSFRGMPFRRLSGCYECRMVVDPVLGFTRDSSLRSSICSCPDCGEVMKTESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNLCNSTPQCNVCSIIKHGFKLSSGGEGILTTATSGKAHDKASSVLDVSGYAGNDEKRAMLVCRVIAGRVKKNTEGGSNGMEEYDSVSAGDVGAYSNLDELYVYNPRAILPCFVVIYRGF* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3115 467 MobiDBLite consensus disorder prediction 150 194 - -
Psa5g3115 467 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 465 - -
Psa5g3115 467 SUPERFAMILY ADP-ribosylation 255 466 - -
Psa5g3115 467 MobiDBLite consensus disorder prediction 72 98 - -
Psa5g3115 467 MobiDBLite consensus disorder prediction 114 194 - -
Psa5g3115 467 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g3115 467 MobiDBLite consensus disorder prediction 49 98 - -
Psa5g3115 467 MobiDBLite consensus disorder prediction 114 137 - -
Psa5g3115 467 MobiDBLite consensus disorder prediction 1 34 - -
Psa5g3115 467 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 465 - -
Psa5g3115 467 MobiDBLite consensus disorder prediction 49 71 - -
Psa5g3115 467 Gene3D - 254 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3115 Psa-Chr5 241293500 241295902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3115 196 465 C2H2 Transcription Factor Family AT1G75710 53.846 3.51e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3115 - - gmx:100817333 634.409